Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1307 ATGGAAGAAGTTGTAATCATCGTAGGAGCTGGCCCTTCTGGTCTTGCAACTTCTGCATGCCTGAATGTTCTCTCCATCCCCAACATAATCCTGGAAAGAGAGGATTGCTTTGCCTCTCTGTGGAAGAAAAGGTCTTATGACCGCTTGAAGCTTCATCTAGGAAAGCAGTTCTGCCAACTTCCTCATATGCCTTACCCCCCAGGTACACCCACATTTATCCCCAAGGCTGGTTTTCTTCAGTACTTGGAGGACTATGTATCTCACTTCCAGATAAACCCTCGATACCACCGCTTTGTAGAGTCTGCATCCTATGATAAGGTTGTAGGAAAGTGGCACATAGTGGCCAAGAACACACTCTCTGATGAGTTAGAGGTGTACCTAGGGAAGTTTCTGGTGGTCGCCACTGGTGAGAATAGTGAGGGTCTCATTCCTAAGATACCTGGGTTGGACAGTTTTGGAGGGGAGTTCATGCACTGTAGCGATTATAAGAATGGAAAGAGATTCACTAACAAAGAAGTTTTGGTTGTTGGATGTGGGAATTCTGGCATGGAGATAGCCTATGACTTATGGGATCATGGTGCAATAACCTCTATTGTTGTTCGCAACCCGGTACATGTGGTTACAAAGGAAATGGTGTTACTTGGAATGCTTTTGTTGAAATACATTCCTTGCAAGGTGGTGGATTATGTTACTGTGTCCCTCTCCAAATTGATTTATGGAGATCTTTCTAGTTATGGGCTTCCAAGGCCAAGCGAGGGACCGTTTTATCTTAAAGATGTAACTCGTTCATCTCCGGTTATTGATGTTGGAACCATAGGGAAGATTAAGGAAGGAGAAATTCAGGTCGTGCCGACAATAACAAAGATAGAAGGTGACAATGTCTATTTTTCTAATGGAAAAATGAATAGGTTTGATGCAATAATCTTCGCTACAGGTTACAAAAGCACTGTTCTAAAATGGCTTAAGGAGAGCGAAGACCTTTTCAATGAGGATGGAATGCCCAAGAAGAGCTTCCCAAATCACTGGAATGGGGAAAATGGTCTCTATTGTGTTGGATTTGCAAGTCGAGGGCTATTTGGAATTGCAAGAGATGCGGAACATATAGCCAACCACATCAGAGGTGTTATGTCGAGGAAATAA 1140 0.4333 MEEVVIIVGAGPSGLATSACLNVLSIPNIILEREDCFASLWKKRSYDRLKLHLGKQFCQLPHMPYPPGTPTFIPKAGFLQYLEDYVSHFQINPRYHRFVESASYDKVVGKWHIVAKNTLSDELEVYLGKFLVVATGENSEGLIPKIPGLDSFGGEFMHCSDYKNGKRFTNKEVLVVGCGNSGMEIAYDLWDHGAITSIVVRNPVHVVTKEMVLLGMLLLKYIPCKVVDYVTVSLSKLIYGDLSSYGLPRPSEGPFYLKDVTRSSPVIDVGTIGKIKEGEIQVVPTITKIEGDNVYFSNGKMNRFDAIIFATGYKSTVLKWLKESEDLFNEDGMPKKSFPNHWNGENGLYCVGFASRGLFGIARDAEHIANHIRGVMSRK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1307 379 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 376 - -
Vvi18g1307 379 SUPERFAMILY FAD/NAD(P)-binding domain 169 364 IPR036188 -
Vvi18g1307 379 PIRSF FMO 1 361 IPR000960 GO:0050660|GO:0050661
Vvi18g1307 379 Gene3D - 2 378 IPR036188 -
Vvi18g1307 379 SUPERFAMILY FAD/NAD(P)-binding domain 5 202 IPR036188 -
Vvi18g1307 379 Pfam Flavin-binding monooxygenase-like 5 342 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vvi18g1307 379 PRINTS Flavin-containing monooxygenase (FMO) signature 3 19 IPR000960 GO:0050660|GO:0050661
Vvi18g1307 379 PRINTS Flavin-containing monooxygenase (FMO) signature 157 171 IPR000960 GO:0050660|GO:0050661
Vvi18g1307 379 PRINTS Flavin-containing monooxygenase (FMO) signature 297 324 IPR000960 GO:0050660|GO:0050661
Vvi18g1307 379 PRINTS Flavin-containing monooxygenase (FMO) signature 110 126 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1307 Vvi-Chr18 13176556 13178357 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1307 K11816 - vvi:100260746 779.245