Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1290 ATGAAAAATATTATGTGGCGGAAGTTCAAGTCTCACTTTACAAGGGCCGGAGGATCTAGAAAGAGTGGCGTGGATAGCTTGTGTACGAAGTCAAACGTGAATGAAGAATACATGGAAGCCTTCAGAACCAAGTCTTACATAGAAATTCACAGCAAAGTTCAGGGTCAGCTCATGAATGAACTCCCCTCCTCCTCCTCATCTTTTCCTTTCTATATCCATCTCTCCGACTACCTCCTCGAGCCATGCCAAGAAACCCTAGCCAACATGATCCAAACCCTAAATCTCCATCACCTTCTTATTGACTACTTCCAAGCCAGCTTAGAAGCATGCAAGATCTGTGAAATACTCCTCCTAAGAATCCATCAAACACGCGCTAATTACCAAATAATCAAAAGGGTAATTAAGCTAACCAAAAGGCTTGATGATGGCGAATACTACACCACAGAACAGTATGGGACCATATTCAGAGAGCTAACTAAGTTCTCAAAGCTCACCAACCCATTAATGGCCGCTGGCCCTGTACAATTCCATGATATCCATGAAAGCTGCAAGACTTTGCTCCCTAAACTCGTATCGAAAAGCAAGAAAACCCGAAGGAGAGCGAAGTTTAACCGGCTGTGCAAGAGGGTTGCAGGGTTTAGTCTCATTATCTCTTATAGTGCAGTGGCGGTTGCTCTGGTGGTGCTGGCGATTCATAGCATAGTTGGCATTGTGATAGCACCAGGGCTCATGGGTTGTTTTGTGGGTGCAGTTAGGAATAGGTATGTGTTTGCTCGTAGGGGACTTGGCACGTGCTTCCTTGAAAGACTTGGGGAACAGCTGGATGCTGCAGCAAAGGGGATTTACATTTTGGTCAACGATTTTGACACCATGAGTCGACTGGTGAGCAGGTTATACGATGAGGTAGAACACAGCAAAGCCATTGTTGATATGTGTGTTAGAAATGGAAAGAGCGAGATGTTGATGGAGGTGGTGAAGGAATTTCATGTCCATGACTCTTTCTTTCTGGAGCAGCTGGAAGAGCTTGAAGACCATATCTACTTGTGTTTGCTCACCATAAATAAATCTAGAATGCTTGTTATTCAGGAAATAAGGGACTCAGAGTAG 1107 0.4435 MKNIMWRKFKSHFTRAGGSRKSGVDSLCTKSNVNEEYMEAFRTKSYIEIHSKVQGQLMNELPSSSSSFPFYIHLSDYLLEPCQETLANMIQTLNLHHLLIDYFQASLEACKICEILLLRIHQTRANYQIIKRVIKLTKRLDDGEYYTTEQYGTIFRELTKFSKLTNPLMAAGPVQFHDIHESCKTLLPKLVSKSKKTRRRAKFNRLCKRVAGFSLIISYSAVAVALVVLAIHSIVGIVIAPGLMGCFVGAVRNRYVFARRGLGTCFLERLGEQLDAAAKGIYILVNDFDTMSRLVSRLYDEVEHSKAIVDMCVRNGKSEMLMEVVKEFHVHDSFFLEQLEELEDHIYLCLLTINKSRMLVIQEIRDSE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1290 368 Pfam Protein of unknown function (DUF677) 91 364 IPR007749 -
Vvi18g1290 368 PANTHER UPF0496 PROTEIN 3-RELATED 22 364 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1290 Vvi-Chr18 12959804 12961382 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1290 - - vvi:100248892 713.375