Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1275 ATGAACAAGGTTAACAAACTCACCGTCCTCGGCCGAGCCGTTGGCGGCCGGGCCTCGGCCGCCGGCATCGGTCTCACCACTCAACGCCGGCTTCTGCAACCGGCTATGTTGGGTCTTAACTCAGCGAGCAAGCTACAGCGGTTCCCTCATAAGCTCGCCGGTCACTTCCCCCTACCCGCTCTTGCCGTATCTGGAACTAGGTTATTGTCCGGACTGGCTCAGGATGTTCCTGCCGAGGATCCGGTGCATCCCAAGAAGTTCCTTCCAAACGACGTAGTTCTGTATCAGTACGAAGCCTGCCCTTTCTGCAACAAAGTTAAAGCATTCCTGGATTACTATGATATTGGATACAAAGTTGTGGAGGTGAACCCCATAAACAAAAAGGAGATAAAATGGTCCCAGTACAAGAAGGTGCCTATACTAACAGTTGACGGTGAACAAATGGTCGATTCATCAGATATAATTAATAAGTTGTTCCAAAGGATTCATCCTGAGAAATACCTTGATTCTGTCCCAGATGGTGATGAAGAAAGAAAATGGCTTGGGTGGGTTGATAATCACTTGGTGCATGTCTTATCTCCAAACATATACCGGAGTGCTTCTGAGGCTATCGAATCATTTGACTATATCACAACCCATGATTGCAGGCAATTTCAGCTTCACAGAGAGAATAATAGCAAAATATGGCGGAGCTGCAGCCATGTATTTTGTGTCAAAGAAACTGAAGAAGAGGCATAG 738 0.4715 MNKVNKLTVLGRAVGGRASAAGIGLTTQRRLLQPAMLGLNSASKLQRFPHKLAGHFPLPALAVSGTRLLSGLAQDVPAEDPVHPKKFLPNDVVLYQYEACPFCNKVKAFLDYYDIGYKVVEVNPINKKEIKWSQYKKVPILTVDGEQMVDSSDIINKLFQRIHPEKYLDSVPDGDEERKWLGWVDNHLVHVLSPNIYRSASEAIESFDYITTHDCRQFQLHRENNSKIWRSCSHVFCVKETEEEA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1275 245 Gene3D - 172 242 - -
Vvi18g1275 245 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 11 224 - -
Vvi18g1275 245 ProSitePatterns Glutaredoxin active site. 94 110 IPR011767 -
Vvi18g1275 245 ProSiteProfiles Glutaredoxin domain profile. 80 175 - -
Vvi18g1275 245 Gene3D Glutaredoxin 85 163 - -
Vvi18g1275 245 SUPERFAMILY Thioredoxin-like 91 188 IPR036249 -
Vvi18g1275 245 Pfam Glutathione S-transferase, N-terminal domain 94 161 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1275 Vvi-Chr18 12776691 12780814 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1275 K05309 - vvi:100248972 425.631