Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1274 ATGGAGAACCCATTTGGGTGTTTGGTCTTCAACGAATGGATCGTCTCGGTGTCTAGAGATAGAGGTTCGATGGAAGCCAAGATGTTTCTTGACTGTAATCCACGTTTAGCCATGTATTCCACCTTCAACGGGCTCAACTCGCCTTTCCATTTCACGACCGCGGAAGGCCGCAATGAGATTGTTGCTTTGCTGCTAAAGAATGAAGCTGATGTGAATCCCAGAAGTTACAATGGCCATACGACATTGATGCAAGCTTGTAGATATGGGTATTGA 273 0.4579 MENPFGCLVFNEWIVSVSRDRGSMEAKMFLDCNPRLAMYSTFNGLNSPFHFTTAEGRNEIVALLLKNEADVNPRSYNGHTTLMQACRYGY* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1274 90 Gene3D - 11 90 IPR036770 -
Vvi18g1274 90 Pfam Ankyrin repeats (3 copies) 34 90 IPR002110 GO:0005515
Vvi18g1274 90 SUPERFAMILY Ankyrin repeat 44 89 IPR036770 -
Vvi18g1274 90 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1274 Vvi-Chr18 12773057 12773329 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1274 K19044 - sspl:121801349 121.709