Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1273 ATGTCGAAGACCGTTTCAACTCGGGGTATGTTGGTTGTGTGCAAGTGCCTTGTCAGAAGACGGAAAAAGGGATTTGAGGTTGCGTACAATGCCACATACTATCCCTGTATGGACATTTTGTGTGAATGCTTGGAAGATAAAGCCAGTGGAAGTGAAACCTGTAGTGTTGTGTTGGCTGGGAGTCGTTTTTATAAAAATAATGGTTTATCAGTCTTCTCTATGGGTAAGATTGGTCATACAAGAATGTGGAAACTTAGTAAGAGAGTATGCTCAACACAACCAGCTGGTGATTTGGGTCCGTTATGCCCCTTCACTATTGGTGTGTATGTGGCTTTAATGATGGCACAAATTGAGTTTTTGAGGAAGAAAATGCACTCATACTCAGAGATTGTCAATGGAGCACGTCTAGGATCAAGGAATAGGGTCCTACGATTTGATCTCATCATCACCCAATAG 456 0.4211 MSKTVSTRGMLVVCKCLVRRRKKGFEVAYNATYYPCMDILCECLEDKASGSETCSVVLAGSRFYKNNGLSVFSMGKIGHTRMWKLSKRVCSTQPAGDLGPLCPFTIGVYVALMMAQIEFLRKKMHSYSEIVNGARLGSRNRVLRFDLIITQ* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1273 151 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 2 125 IPR013023 GO:0009082|GO:0016491
Vvi18g1273 151 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 4 151 IPR008927 -
Vvi18g1273 151 Gene3D - 1 138 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1273 Vvi-Chr18 12772148 12772603 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1273 K00053 - vvi:100262542 192.586