Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1272 ATGTCTCGATGCTTTCCTTACCCGCCTCCAGGGTATTTTCCAAGGAGGACAGTCGATGAGGCCTTGATCGAGTCGACTAAGCTCCAGAGAGAAAAGAAGGCCAAGGAAGACAGACATCAGAAGGACAGGAAAGAGAGAAAGAGAGAGAAGAAAGAGAAGAAGGAGAAGAAGAGGGAGAAAAAAGAGAAAGAGAAGGGCAAGGATATAGCCAGTGACATCGGTGATGGTAACCTCAATGACAAGAAGGGGCAGTCTCAAAGGATTAGAAAAGATGAAGCTGAGCAGTTGGAGAAGAGTGATCTCACTGAAGAATATGGACAGCCTATCTATTCACAGAACTCCTGCCATTCATCTGACAGCACCCAGAACAGCCGCAAGAGGAAAAGGGATACCTCACTCTCAAGTGGCAGCAGTAATCATGGGAACATTATTCGGTTACGTCTGCCACTTCCAAAGCCCAAAGAACCGGAGGCATCACTCACCAAAGAGCAGAACTGCTCAGAACGGCTGCCACTTCCAAAGGACTATGGACCTGAGGCATCACTCGGCAAGGAACAGAGCAGTTCCATGCGACTGCCACTCCTAAAGCACAAGGAACCTGAGGCATCAGTCAGCAAGGAACACAGCAGTTCCATGCGGCTGCCACTCCTAAAGCGCAAAGAACCTGAGGCATCAGTCAGCAAGGAACAGAGCAGTTCTATGCAGCTGCCACTTCTAAAGCACAAAGAACCTGAGGCATCACTCAACAAAGAGAAGAGCTGCTCTATATCAAAGCACAAAGAACCTGAAACATTACTCAGAAAAGAACAGAACCGCTCAGTATGGATGCCACTTACAAATCTGAGAGAGCCTGAGGCATCACTGAGAGCGGAGAGCTGCAGTACCTCTGGAAGGGTGGATTTACCTGCCCAACAAAAGTATGAAATATCTGGTCAATCTATTGAAGCGCCACCAATCTTTTCTATGAGAACCAGTACTGTTGACCAGAAACTCAACCCTGACCAGCAATTGCTTTGTTCAACCTCCAAGGTGCCTGAAATTGTTGTACAAAATGATGCCAATGCCAGCAAAGGATCAAGGTCAAGCAAAAGTAAGAAGCAGAGAGCAGAATCTCGGTATAAAGCTCTAGTAGAGGACTGGGTCCCTCCGCTGTTGCAGGCTGAGCAGACTGATTTGGATGATCAAGAATGGCTATTTCAAAAACATGGAGACAGGCACGAGAGTAAGCGGCATGAAACTATCAACTATGACCTGAGTTATGGAAGCTGGCCTCGCGCACAGTATCTTCCGGAGGCTGATGTATATGCATTGCCTTATACTGTCCCTTTTTAA 1332 0.473 MSRCFPYPPPGYFPRRTVDEALIESTKLQREKKAKEDRHQKDRKERKREKKEKKEKKREKKEKEKGKDIASDIGDGNLNDKKGQSQRIRKDEAEQLEKSDLTEEYGQPIYSQNSCHSSDSTQNSRKRKRDTSLSSGSSNHGNIIRLRLPLPKPKEPEASLTKEQNCSERLPLPKDYGPEASLGKEQSSSMRLPLLKHKEPEASVSKEHSSSMRLPLLKRKEPEASVSKEQSSSMQLPLLKHKEPEASLNKEKSCSISKHKEPETLLRKEQNRSVWMPLTNLREPEASLRAESCSTSGRVDLPAQQKYEISGQSIEAPPIFSMRTSTVDQKLNPDQQLLCSTSKVPEIVVQNDANASKGSRSSKSKKQRAESRYKALVEDWVPPLLQAEQTDLDDQEWLFQKHGDRHESKRHETINYDLSYGSWPRAQYLPEADVYALPYTVPF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1272 443 Coils Coil 18 67 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 105 120 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 55 75 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 23 43 - -
Vvi18g1272 443 PANTHER MYB-LIKE PROTEIN X 1 443 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 191 226 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 23 271 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 82 101 - -
Vvi18g1272 443 MobiDBLite consensus disorder prediction 243 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1272 Vvi-Chr18 12767505 12770416 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1272 - - vvi:100242117 785.793