Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1260 ATGGAGACTCAGAGCTCTCCTCCATGTCCCTACACGGTAACGGTTCGAAGAAACCCTCATCGCAAAGCCAGGGCAACGCCTTCAACAAGCGTTCCTCCTCGTCCTCTTCTTTCAAACCCCATTACTTCAGAAATTCCAGCATTTCCGATCCAAGAAATTTTGGCCATGCAAGTCCCTCAAACCCTCCCAACTCCCTCCCCCGAAAATCTCAGAGTTTTTCTCAGAATTCGACCCCTCATCACTCTTCAAGGGTCGGGAAAGTGTGGGAGTCGCGGAAATCAAAGTTCCAAGTCCGTGGCGAAAAACGTGTGGCCTCAGAACCCTAGCACGAAGATTAAGAGAAAGAAGAACAAGAACTCTGAAATTTGTATCGCGGTTAATAACACGCAGTCGGTGACACTCTCGCCGCCTTCCCACTTGAAGGATCTGAAGCGGATCAAGTCTGAGGTCTATGAAGGCTTTTCTCATGTGTTCTCTGCCGATTCTTCTCAGGAAGAAGTCTATGAAAGGATGGTGAAGCCTTTGGTGGAGGATTTCATCAATGGCAAAAGCGGGATGCTGGCTGCATTGGGCCCTAGTGGATCTGGCAAGACCCATACTGTTTTTGGGTGTCCAAGGGAGCCTGGAATGGTACCTCTTGCACTTCAACAAATTTTCAAGCGGACTGAGGGGAGTGGTTCTGAGGCAACAAGGTCATTTTACATATCAATATTTGAAATATATTCTGAAAGAGGAAAAGGAGAAAGGATGTTAGATTTGTCCCCAGGTGGAGCAGATTTATTCATGCAACAGTCATCTATAAAAGGTCTTCAAGAGGTAGTCATTTCTGATGTTGCACAGGCAGAATCCTTAATAGCACAAGGCATGTTAAAACGCTGTACTGCAATGACAAATTCAAACAGCCAGTCAAGCCGGTCACAGTGCATTATAAACATCCGCAGTGCTCCTAACAACTTAGAGAGTGACGTTGGTGTTCAACTGAACAGTGCAGTATTAACTATTGTTGACCTTGCTGGTGCTGAAAGAGAAAAGAGAACTGGGAATCAGGGGGCCAGATTACTTGAGAGCAATTTCATCAACAACACATCAATGGTTTTTGGATTGTGTCTGAGGTCATTGTTGGAGCATCAAAGGAACCCCAAGAAGCCACTACAGAAACATTTTCAGAACTCTTTGTTAACTAGGTACTTACGAGATTATTTGGAAGGCAAGAAGCGGATGGCATTGATTTTGACGATAAAGCCAGGAGAAGAAGACTATCTTGATACATCCTTTCTACTAAAACAAGCTTCCCCTTATATGAAAATCAAGTTCAATAATGTTGAAGAATTGTCCGATTTGGTTGCTAATAAGAGGCATGTTCGAACATTACCTAGATTTGAACAGCGCAAAAGAATGAAGTTCAGTAACCCTGATGCTTGTGTGGTCAATCCAGAGGAGCTCAAGGAGACTGGAACCGTAAAAGCTCTGGTTCAGTCCCCAAGAAATTCTAAATTGGATGTTTATGATAGCACATTTCTCAAGTTGAATGGTGTTGAATTGGCAAAGAGAGAGAGAAACAATCAGATTATGCAAGGTTTTGCAAAAGCTTTATGGGATGTTTTGAAGCAATATAAGGAAAAACTTGAGGCAATTTTAGCAGTAAATATACCAATCCATTTGACAACTCTGCTTTAA 1677 0.4311 METQSSPPCPYTVTVRRNPHRKARATPSTSVPPRPLLSNPITSEIPAFPIQEILAMQVPQTLPTPSPENLRVFLRIRPLITLQGSGKCGSRGNQSSKSVAKNVWPQNPSTKIKRKKNKNSEICIAVNNTQSVTLSPPSHLKDLKRIKSEVYEGFSHVFSADSSQEEVYERMVKPLVEDFINGKSGMLAALGPSGSGKTHTVFGCPREPGMVPLALQQIFKRTEGSGSEATRSFYISIFEIYSERGKGERMLDLSPGGADLFMQQSSIKGLQEVVISDVAQAESLIAQGMLKRCTAMTNSNSQSSRSQCIINIRSAPNNLESDVGVQLNSAVLTIVDLAGAEREKRTGNQGARLLESNFINNTSMVFGLCLRSLLEHQRNPKKPLQKHFQNSLLTRYLRDYLEGKKRMALILTIKPGEEDYLDTSFLLKQASPYMKIKFNNVEELSDLVANKRHVRTLPRFEQRKRMKFSNPDACVVNPEELKETGTVKALVQSPRNSKLDVYDSTFLKLNGVELAKRERNNQIMQGFAKALWDVLKQYKEKLEAILAVNIPIHLTTLL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1260 558 Pfam Kinesin motor domain 116 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 PANTHER KINESIN-RELATED 72 488 IPR027640 GO:0003777|GO:0007018
Vvi18g1260 558 Gene3D Kinesin motor domain 66 468 IPR036961 -
Vvi18g1260 558 ProSiteProfiles Kinesin motor domain profile. 69 436 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 437 IPR027417 -
Vvi18g1260 558 MobiDBLite consensus disorder prediction 1 38 - -
Vvi18g1260 558 PRINTS Kinesin heavy chain signature 386 407 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 PRINTS Kinesin heavy chain signature 182 203 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 PRINTS Kinesin heavy chain signature 297 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 PRINTS Kinesin heavy chain signature 331 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 SMART kinesin_4 67 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1260 558 FunFam Kinesin-like protein KIN-6 62 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1260 Vvi-Chr18 12620842 12628019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1260 153 439 Miscellaneous Gene Families AT2G21380 33.333 4.67e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1260 K10401 - vvi:100252261 1060.44