Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1254 ATGGCGTTCAGATCTAGGGAGATGATGAAGAAGATCGTGAAAAAAATGGGAGACAACAAATTGGAGGAATCGCTGAAGAAATATGTTCCTGACAGCAAGGTGGTGATGGGTAGAGCCAAGCGTGGAATCTATGCTGGTCGCCACATCCAGTTCGGCAACCGCGTCAGCGAAGACGGCGGTAACAAGACAAGGAGGAGTTGGAAGCCAAATGTCCAGGAGAAGCGGCTCTTCAGTTACATCCTGGACCGCCACATTCGAGTTAAGGTCACTACGCATGCACTCAGATGCATAGACAAAGCAGGTGGGATTGATGAATACCTGTTGAAGACGCCCTACCACAAGATGGACACAGAAATGGGCCTCTTCTGGAAAGCAAAGATCGAGAAGATGTACGAAGAGCTTGGGGAGATGGATGTAGTTTTCTTTTCACCTGAGGATGAAGTAAAATTTGAACAGGGCTTTAAAGAACTGAAACTAGCTGAGAGAGCAGCTCGCAGAGAAGCCAGAAGACATATATATGGTGGGTCTGGCAAACAGGTGCAGCTTGAGGAAGGAGGTGCAGACATTCAAGAAACCAATGAGGTCGCAGCAAGAGTTCTGGAAGGGAGCTCACATGTTGATGCTCCTGAGCGGTTGGTGGCAAACTCTTGA 651 0.4839 MAFRSREMMKKIVKKMGDNKLEESLKKYVPDSKVVMGRAKRGIYAGRHIQFGNRVSEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLFWKAKIEKMYEELGEMDVVFFSPEDEVKFEQGFKELKLAERAARREARRHIYGGSGKQVQLEEGGADIQETNEVAARVLEGSSHVDAPERLVANS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1254 216 FunFam 54S ribosomal protein L24 43 114 - -
Vvi18g1254 216 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 1 191 IPR026569 GO:0003735
Vvi18g1254 216 Hamap 50S ribosomal protein L28 [rpmB]. 38 106 IPR001383 GO:0003735|GO:0005840|GO:0006412
Vvi18g1254 216 Pfam Ribosomal L28 family 41 100 IPR026569 GO:0003735
Vvi18g1254 216 SUPERFAMILY L28p-like 39 115 IPR034704 -
Vvi18g1254 216 Gene3D Ribosomal protein L28/L24 43 114 IPR037147 GO:0003735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1254 K02902 - vvi:100262488 419.468