Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1243 ATGGGAGCGGTATGCTCAGGCGGGATGATGAAGCGAAATTCGGGAAAAAATTTAGGGTTTTCTGGGAAGCTGAAGAAAGTGAAGAGTTTGCGTAAGCAAAAAGAGGATTCTTATTCATATTCTAATCCTAATGTGGATGGTTTTGAGAGGACGCCACAGATGTACGATCCTGGAGAGCTATCGTTTTCGATTTCACGAGAACTAAAACCTTCAACGCCTGCAAGAACAGGGGCAAGCAAGGTGCCCCAGAAGACCTCATTTCTGGGAAGGGCTGGTGTTGTGGGCCTAGAGAAGGCAGTGGAAGTCTTGGATACACTGGGAAGTAGCATGTCAAGTTTGAATCCCCACAGTGGGTTTGTATCTGGCATTGCTTCCAGAGGAAATAAAATATCTATATTGGCATTTGAAGTAGCTAATACAATAGCCAAAGGTGCAAACCTACAGCATTCTCTTTCTGAAGAGAATATCCAGTTTCTGAAAAAGGAGATTTTACATTCAGAAGGAGTGCAACAATTAGTTTCCACAGATATGACAGAGTTGCTAAGTATTGCTGCTGCTGACAAAAGAGAGGAATTTGATGTTTTCTCACGGGAAGTAATTAGATTTGGAGATTTATGTAAGGATCCACAATGGCACAACCTGGATCGATATTTTTCAAAGTTAGATACAGATGATCCCAGCCATAAACAACTTAGAGAAGAGATAGAAGTGACAGTTCAAGAGTTAACTACTTTGGCTCAGCATACTTCTGAATTATATCATGAGCTGAATGCTGTAGACCGATTTGAACAAGATTATCGACGGAAGCTTGAGGAAGTGGAGTCCTTGCATCTTCCTCGTAGAGGAGAGAGCCTCACAATGTTACACAGTGAGCTAAAACATCAAAGAAAGCTTGTAAGGAGCTTGAAAAAGAAATCGCTTTGGTCTAGAAACTTGGAGGAGATTGTGGAGAAGCTTGTTGATGTTGCTACATTCATACATCAAGAGATCTTGGAGGCATTTAGAAGTAATGGTTTGACATTGACTATCAAGGAACCTAGCAATTGCCCTCAAAGACTGGGTGCAGCTGGTCTTTCATTACACTATGCCAACATTATCAATCAGATGGATAACATAGCATCTCGGCCTACCTCCCTTCCTCCCAATATGAGGGACACATTATATCATGGGTTGCCGGCCAGTGTTAAGACAGCACTGCGCTCCCAGTTGCAAGCAGTTGATGCCAAGGAAGAGCTTACAATTCCTCAAATCAAAGCTGAAATGGAAAAAACTCTCCAATGGCTTGTTCCAGTAGTAACAAATACAACCAAAGCACACCAAGGTTTTGGGTGGGTTGGAGAGTGGGCAAATACTGGGAATGAGTTTGGCAAGAAGACAACTACACAAAATAACCTGATCCGCCTCCAGACGTTATATCATGCAGATAAGCAGAAGATAGACCAATACATCCTTGAATTAGTAATATGGCTTCATCGTCTTATCAACCTAGTAAGACATAGAGATCATGGTTTCAAGCCTCTGTCTACTCGGTCCCCCCCCACTCATAATGGGCTGGTTTTTCACTCCAAGATGGAGCGGTTCCCATCGCTTGATTATGTTACCAAAGTCCATGGGGTTCAACTTTCTCAAGAGGATAGAAATTTGTTGGGAGAAGTTTGCTGGAGAAGGTTGGTTCCTGGAAAAAGCAAAAGTCAGGAATTTGCCATGACAAAGAAGAAACGGCCAGAAGTTTTGGTTATGACCAGGAGTGCTGGCAGCTCCCCAAATAGGGAGTTGAATATAACTCAAGATTTGGAATGCCTGAACACTAATGTTTTAGATGAGATGGATGGGTTAGACACAACATTATCTGGGCCTTAA 1860 0.4247 MGAVCSGGMMKRNSGKNLGFSGKLKKVKSLRKQKEDSYSYSNPNVDGFERTPQMYDPGELSFSISRELKPSTPARTGASKVPQKTSFLGRAGVVGLEKAVEVLDTLGSSMSSLNPHSGFVSGIASRGNKISILAFEVANTIAKGANLQHSLSEENIQFLKKEILHSEGVQQLVSTDMTELLSIAAADKREEFDVFSREVIRFGDLCKDPQWHNLDRYFSKLDTDDPSHKQLREEIEVTVQELTTLAQHTSELYHELNAVDRFEQDYRRKLEEVESLHLPRRGESLTMLHSELKHQRKLVRSLKKKSLWSRNLEEIVEKLVDVATFIHQEILEAFRSNGLTLTIKEPSNCPQRLGAAGLSLHYANIINQMDNIASRPTSLPPNMRDTLYHGLPASVKTALRSQLQAVDAKEELTIPQIKAEMEKTLQWLVPVVTNTTKAHQGFGWVGEWANTGNEFGKKTTTQNNLIRLQTLYHADKQKIDQYILELVIWLHRLINLVRHRDHGFKPLSTRSPPTHNGLVFHSKMERFPSLDYVTKVHGVQLSQEDRNLLGEVCWRRLVPGKSKSQEFAMTKKKRPEVLVMTRSAGSSPNRELNITQDLECLNTNVLDEMDGLDTTLSGP* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1243 619 Pfam Protein of unknown function (DUF668) 352 437 IPR007700 GO:0045927
Vvi18g1243 619 PANTHER OS01G0873900 PROTEIN 1 613 IPR045021 GO:0045927
Vvi18g1243 619 MobiDBLite consensus disorder prediction 31 52 - -
Vvi18g1243 619 Pfam Domain of unknown function (DUF3475) 132 188 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1243 Vvi-Chr18 12384203 12402206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1243 - - vvi:100241980 1212.98