Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1240 ATGACTACCGATGCTTTTCCTCCGGTCATAGCTGCGCAGATCAATTATTTGCTTTCTCATTCTCCTCTTTCCATTAAGATTGATCAGATGTGGGCTGGTTGCAAGTACTCTGGTTTGCTGGATCGCTTCTCTTTGCTCATTCCCTTCTGTTTAGATTTCATCAAATGGGATGTCATATATAATGCGCAGTGTCCATTGGCTGCTCCAGATGTCATATTTGGACCTGAAGATGAAAATTTTCATCCATTTTGTGTGACTGGTGATGAAGGGGATTTTAAGTTGTCAAAGAACAGTTTGTCTGATTGGAATAGCAAGGACCCTTCAGGGTTACTGACTCTTATTCATGAACTGAGGGATCTATACTTGTCCTACCAGAAGAAGCGCATTGGAGAAGTTGATGATGATAGACTGAAATTTGAAATTAGCACAATTGTATCAAGGGAGGGAATCGAAATGTACATGAGTTCGGGTGTTGAAAAGCCAGAGGAAGTAAAATTTTCAGTGCCTCTTTTGGACATGGATATAAATAAAATGGTATTTGGTTGCAACTGGAGACATCAGCAGAAGATATACTTACAGGTTATATTTCCTGTTGGAAGAAAATATGTGTCTGCCCCTTCAGCTCCACGTTTAAAATTAGTATCTTCTCCTGAATTGAAGGTTCTCTTTCCTATTGAAGATGTCAAGCTTCCTCCATGGTTGGATGGGATGTGCATGGCTGAATATCTTCCCAATTTAGAAGAAACACTTGAGAGACAGATCTTGGATGCAGTTTCATTAATTGATGTTAGAAGACACTTTATTGAGGCATTGGCACCCGTATTTGGAAGGCCATTAGAAGCTGATCCGGTGTTTTGCAGAAAAGTTACATTTCTTGCTGCATCTGGGGTGTTTACATGTCTGGTGCATTTTTTCCTTCCAACGCAGTTCCCAAAGCAACAGCCAGTTTTGATGCTTCAAAGTTCTCAGCATTTCAATTCCCAAGGTGCACCAATCAAATCACATCTTTTGACAGAGTATCCGTGGAGTCCTAGATGGGAATCATCACAAATGGCTGAGCGAATCTTAGAGTTTCTGGTGGATGAATGTTTGAACTTCAAAAAGTTCTGCAATGAGGCTCAACTTTAG 1128 0.4051 MTTDAFPPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIYNAQCPLAAPDVIFGPEDENFHPFCVTGDEGDFKLSKNSLSDWNSKDPSGLLTLIHELRDLYLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMSSGVEKPEEVKFSVPLLDMDINKMVFGCNWRHQQKIYLQVIFPVGRKYVSAPSAPRLKLVSSPELKVLFPIEDVKLPPWLDGMCMAEYLPNLEETLERQILDAVSLIDVRRHFIEALAPVFGRPLEADPVFCRKVTFLAASGVFTCLVHFFLPTQFPKQQPVLMLQSSQHFNSQGAPIKSHLLTEYPWSPRWESSQMAERILEFLVDECLNFKKFCNEAQL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1240 375 Pfam Brain and reproductive organ-expressed protein (BRE) 24 325 IPR010358 GO:0070531|GO:0070552
Vvi18g1240 375 PANTHER BRISC AND BRCA1-A COMPLEX MEMBER 2 2 374 IPR010358 GO:0070531|GO:0070552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1240 K12173 - vvi:100264259 771.541