Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1233 ATGGCGCCTTCAACACTGACTGCATTGGTAGAGGAGAAGACTCTTCAGCAAAGCTTTGTCCGGGACGAAGATGAGCGTCCCAAGGTGGCGTACAACCAGTTCAGCAACGAGATTCCGGTAATTTCTCTGGCCGGAATCGACGAATCCGAAGGCCGGAGGTCGGAGATATGTAGGAAGATTGTGGAGGCGTGTGAGGACTGGGGAATTTTCCAGGTGGTGGATCATGGCGTCGACGCAAATCTCGTATCGGATATGACTCGCCTCGCTAGGGAATTCTTTGCTTTGCCTGCGGAAGAGAAGCTTCGGTTCGACATGTCTGGTGGCAAGAAGGGAGGATTCATCGTCTCCAGTCATCTCCAGGGAGAAGCAGTGCAAGATTGGCGTGAGATAGTGACATACTTCTCATACCCACTCCGAACCCGAGATTACTCCCGGTGGCCAGACAAACCGGAGGGATGGAGGGCTGTGACTGAGGTCTACAGCGAGAAGCTGATGGGTCTTGCCTGCAAGTTGCTGGAGGTACTGTCGGAGGCCATGGACCTTGACAAGGAGGCTCTCACTAAGGCTTGCGTGGATATGGACCAGAAAGTGGTGGTCAATTACTATCCCAAATGCCCACAACCTGATCTCACGCTCGGACTCAAACGGCATACGGATCCAGGTACCATAACCTTGCTGCTCCAAGATCAGGTTGGAGGACTCCAGGCGACGAGGGATGGTGGCAAGACTTGGATCACTGTCCAGCCCGTGGAAGGAGCATTTGTTGTCAATTTGGGCGACCATGGTCATTATCTGAGCAATGGGAGGTTCAAAAATGCGGACCACCAAGCTGTGGTGAACTCCGACTGCAGTCGGTTGTCGATTGCCACGTTCCAGAACCCAGCCCCAGAGGCAGTTGTGTACCCACTCAAGATCAGAGAGGGAGAGAAGTCGGTGATGGAGGAGCCCATAACATTTGCAGAGATGTACAGGAGGAAGATGAGCAAGGATCTTGAACTTGCCAGGCTGAAGAAATTGGCAAAACAGCAGGATCAGCAGGAGAGGAAACCGAAAGGCATTGAAGAGATTCTTGCTTGA 1077 0.5274 MAPSTLTALVEEKTLQQSFVRDEDERPKVAYNQFSNEIPVISLAGIDESEGRRSEICRKIVEACEDWGIFQVVDHGVDANLVSDMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRAVTEVYSEKLMGLACKLLEVLSEAMDLDKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSDCSRLSIATFQNPAPEAVVYPLKIREGEKSVMEEPITFAEMYRRKMSKDLELARLKKLAKQQDQQERKPKGIEEILA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1233 358 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 35 299 - -
Vvi18g1233 358 SUPERFAMILY Clavaminate synthase-like 11 329 - -
Vvi18g1233 358 Pfam 2OG-Fe(II) oxygenase superfamily 195 293 IPR044861 -
Vvi18g1233 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 294 IPR005123 -
Vvi18g1233 358 FunFam Naringenin,2-oxoglutarate 3-dioxygenase 6 333 - -
Vvi18g1233 358 Gene3D - 6 333 IPR027443 -
Vvi18g1233 358 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 148 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1233 Vvi-Chr18 12303097 12304871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1233 37 291 Glycosyltransferase AT5G59530 33.462 4.00e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1233 K00475 - vvi:100253950 721.465