Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1229 ATGGCCATCTCCAAAACTCTCATTGCTTCACTTCTCATTTCTCTTCTTGTTTACCAGATTACTGAGGCGGCGACCACCAGCGGCGACGGAGCGAGTTCTCCGACAGAGAAAATGGATTGCGGGGGAGCATGCAGTGCGAGGTGTAGGCTGTCGTCGAGGCCAAATCTGTGCAACAGGGCATGTGGGACTTGCTGCGCTCGTTGCAACTGCGTCCCTCCAGGCACGTCTGGTAACCAAGAGATCTGCCCCTGCTACGCCAACATGACCACCCGTGGCAACGAACGCAAGTGCCCTTAA 297 0.5589 MAISKTLIASLLISLLVYQITEAATTSGDGASSPTEKMDCGGACSARCRLSSRPNLCNRACGTCCARCNCVPPGTSGNQEICPCYANMTTRGNERKCP* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1229 98 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 2 98 - -
Vvi18g1229 98 Pfam Gibberellin regulated protein 39 98 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1229 Vvi-Chr18 12276091 12276555 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1229 - - vvi:100266028 211.075