Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1227 ATGGACAAAGGTCGAGACGTGAGGCGTGCACAGAGTCGGTTCTCGCCTGCCAAGCGACAGATTAAGCAATCGGTACACAAGCTCCTCTCTGGCTTGGATGGCTGTGAGGGTCGTGGTGGGGACGCTGTTTTCCCGGAGAAACCAAAGAAAGAAAGGGTGAAAAAATTGAGTGTTGTTGGTAGAGCCAATTCCGTTAACGAAGACGTGGAAATGGGTTGTTCTGGGACTTATGGGTCTGAAGAAGAAGAAGAGCAGCAGCTTCGATCCCAAGCTCCTAGTCCTGGCAGTAGCAAGAGATTCAAGCTTCCCAAAAAGTTTTTTGATGACTGCAATGGCGTGGATCATTCCTCTGTTCCCCGGAAGCTTCGGTCAGCCATGAAGAAGCGCAGCCGTGAATCTGTTTCTCCGCCTTTGCCGGAGCCAAAGAAGCTGAACAATGGAATTAATGGAGTTGACACCCCTCCAAAGGGTGGTGTAAAGAAATCTAAACTGAACTTGAAGCATGGTGGCTCAGACTGGTCTCAGAAGCAACCCATTTCAGGACCAATTACCAAAGAGGAGGAAGAAGCAGTGGAGTCCCTGTACGCATTGGCAGGAATGTTCCCGGACAATGATAAGACGGACAATAAGGGTGAATTGGTTGGCGAATCATCAGAATCAAAGCCTTTAACTTTGCCAGAGGAGGGGGAGAGCCCTGCACCCGCATTAGTTTCAGAAGAGGACTCTAAATGCCTAACTGGAGCTGGTGAGGCTGCCAATCCTTTGTCTAATTCACTGGGAGAAACTGTGGAAAAAGTCAAATCTTTGAAAGAACCCACTGTTCAAGAACAGGGTAACATTCCCACTGGCGAGCAAGAACATACAGGATCAGATGGATCTGTTCCTCAAGTGAATATACGAACAATACCTTCCTTGTCCAAGGGTGAAGTCGCTGATGAAAAGTTGGTACTCAGATCTGTCAAGTTTGATGTTCCATACGAACAAAGCCTGGATACTGGACTAATGAAGTTAAAACAACAGGAGGCCCCTATTCCTGAGACCAAACCAGAGATTGAGCAACAACATACCATCAAAGACAGCAGGAAAAATGATCTGGTATTGTGGCCGGGCTTGTCATCAACAGGGTCGATTGGGACTGCAATTCATGGCCTGCCCTTACATTCTTCAGCTAAAACTCAAGCTTGGCTGGATAATGCTACTGGCACTACAGGACCTAGTTCATTTGGAAATGGTGTCTCAACCGAAAAGGTTTCTAGAGTTATGGTGCATAAAAAGCAACCATGGAAAAGATGTGCAGCTCATGTTCGCATAAGTCGTCTTATTCAGGATTTACAAAATTCAGAGAGAAAGGAAAGGTTGTCAATGCAGCCAAACCAATTGAGAACAGATGAAGGATCAAAGCAAGTAGGTTCTCTGGCAGGCAACAATCCCAGTGGCCTGAGAAATGGATTGAATGGAGTTGTTTCTGCTAACAGCATAGGTGGTTCAGCTGTGGAGAACAATTCAACCGAAGCTAGAAAAGATATTCTTCTGCAGCAGGGGCTCCATCAAGATCAGCAGCAGGCTCCTGCTTCTGGGACCTACACTTCTCAAAAGCAGAGTTACGATTTCTTGTCTTTGTCGGCTGGAGGTGGTGGGGTTGAAGCTAATAATAGCTCTAACAGAGCAGTAAATGATCCGGAACCCTCATCTCAACTCCATGTTCCTTACCTACATCCACTTCCACAACATCACACACTTATCCCCTTTTCTCTGCATCAAACTCGCTATTCTGCTTCTCCTTACCCAGATCAGCTTTCAGCAGCCGCAGCAGCAGTAGCTCAGCAGGTCCAGCTGCAGCTATCTCCATATCTCAGCAACAATTTATGTGGATCCCCTCATATGGCCCTTTCAGGCTCAAAACAACAGCAGCAACAACAGCAGCAGCAGCAGCAACATCAACAGCAACAAAGGATGTGGGCTCAGCTGGCAACTCAATACAGACCGGCGGGTATTTCTGCATCCCATATTCCAAATTGGCAAAATGGAAGACATGACCCAACCCCTCCAATCCAATATGCTCAAGCCATTCTCCCTCCCAGTTCATCACTAGAAGTACTAGGCCCCAAATATGCGCCAATCTCACAGCAACAGCAGCAGCAACTCATTGCCATCACTTCATCCCTGTCACCTGCCAGGGCCAAAAGGCAGCACAACCATCTCCCTTCAGGCTTAGATGAGAATGGTGGTGGGTTCCGTTCCGACAGTGCCCTGCCATTGCAGTTACTCTGCAACGAGCATCTTTAA 2286 0.4746 MDKGRDVRRAQSRFSPAKRQIKQSVHKLLSGLDGCEGRGGDAVFPEKPKKERVKKLSVVGRANSVNEDVEMGCSGTYGSEEEEEQQLRSQAPSPGSSKRFKLPKKFFDDCNGVDHSSVPRKLRSAMKKRSRESVSPPLPEPKKLNNGINGVDTPPKGGVKKSKLNLKHGGSDWSQKQPISGPITKEEEEAVESLYALAGMFPDNDKTDNKGELVGESSESKPLTLPEEGESPAPALVSEEDSKCLTGAGEAANPLSNSLGETVEKVKSLKEPTVQEQGNIPTGEQEHTGSDGSVPQVNIRTIPSLSKGEVADEKLVLRSVKFDVPYEQSLDTGLMKLKQQEAPIPETKPEIEQQHTIKDSRKNDLVLWPGLSSTGSIGTAIHGLPLHSSAKTQAWLDNATGTTGPSSFGNGVSTEKVSRVMVHKKQPWKRCAAHVRISRLIQDLQNSERKERLSMQPNQLRTDEGSKQVGSLAGNNPSGLRNGLNGVVSANSIGGSAVENNSTEARKDILLQQGLHQDQQQAPASGTYTSQKQSYDFLSLSAGGGGVEANNSSNRAVNDPEPSSQLHVPYLHPLPQHHTLIPFSLHQTRYSASPYPDQLSAAAAAVAQQVQLQLSPYLSNNLCGSPHMALSGSKQQQQQQQQQQQHQQQQRMWAQLATQYRPAGISASHIPNWQNGRHDPTPPIQYAQAILPPSSSLEVLGPKYAPISQQQQQQLIAITSSLSPARAKRQHNHLPSGLDENGGGFRSDSALPLQLLCNEHL* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1227 761 MobiDBLite consensus disorder prediction 67 296 - -
Vvi18g1227 761 PANTHER OS02G0121500 PROTEIN 1 761 IPR040305 -
Vvi18g1227 761 MobiDBLite consensus disorder prediction 101 116 - -
Vvi18g1227 761 MobiDBLite consensus disorder prediction 625 653 - -
Vvi18g1227 761 MobiDBLite consensus disorder prediction 1 22 - -
Vvi18g1227 761 MobiDBLite consensus disorder prediction 272 296 - -
Vvi18g1227 761 MobiDBLite consensus disorder prediction 458 483 - -
Vvi18g1227 761 MobiDBLite consensus disorder prediction 448 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1227 Vvi-Chr18 12262921 12267081 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1227 - - vvi:100243848 1444.48