Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1219 ATGGGCAAGGGAAAGGGAAAAGGAAAGTTGAAGGGCAAATCCGTTGGTATGCGTCAATTCTCCACCGATGAGGAGATTGTGGCTAGTATCTTTATTCATTCTAGTACTTTCAATCAAGAAGAAATTGAAGGAAAAGAAGAATACTCTGGAGAAGAATTTGAAGAAGAACCTCGTGAGGTAAGGCGAAAAGGTGTCCAAGGTTTGATTGAGGTTGAGAATCCTAATTGGGGGAAGCCAAATGTCTTGAAAGTTAAAGACATTGATGTTGAAAAAATAACTCAACTTTCCAAGCATGAAAAAAATGAAATAGATAAACAGAAAAGATATGAACGAGGTATGAAATTACACGAGGAAGGGAAAACAGAACAAGCAAAGAAAGATTTAGAACGTTTAACTTTGATTCGGCAACAAAGAGTTGATACTGCTAAAAAGCGAGAAGAAGAAAAAGCTTTCAAAGAGAAAAAGAAGGAAGAAAAAGCTTTCAAAGAGAAAAAGAAGGCCGAGGCTCGCAAATGA 516 0.3702 MGKGKGKGKLKGKSVGMRQFSTDEEIVASIFIHSSTFNQEEIEGKEEYSGEEFEEEPREVRRKGVQGLIEVENPNWGKPNVLKVKDIDVEKITQLSKHEKNEIDKQKRYERGMKLHEEGKTEQAKKDLERLTLIRQQRVDTAKKREEEKAFKEKKKEEKAFKEKKKAEARK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1219 171 MobiDBLite consensus disorder prediction 102 171 - -
Vvi18g1219 171 Pfam Casein kinase substrate phosphoprotein PP28 73 150 IPR019380 -
Vvi18g1219 171 Coils Coil 144 171 - -
Vvi18g1219 171 PANTHER 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN PDGF-ASSOCIATED PROTEIN 6 160 IPR039876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1219 Vvi-Chr18 12205116 12205631 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1219 - - vvi:100258915 148.288