Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1215 ATGTCGCAAAATAGCCTTCAAAACGATTCGATTCAAAACCCTAGAGTGACCTGGGAAGGCTGCAGTGTGTTGCTCGACATCAACGACGGCGATCGTCTGGTTTTCGCTCGTCTCTCGGCCTCCGCGACTTTGAAAATTGGGAATAAAAACTGCTCCTTGCAGCCGTTGATTGGCTGTCCCTTCGGTTCTTTGTTTCAGGTTGATAACGGACCCAGAGGGCCGTATTTATCTCGTGTTACACCCTCTGCAGAAGGTAATGATCTTCAAGAAACACAAGATTGCCAATTAAAAGATGAACCCAAAGATAATCGAGCAATAGTTGATAATAATAAAGCTCAGAGTCTTACTGGTGAAGATATAGATGAAATGCGGAGACAGGGTGCAACAGGTGATGAAATAGTTGAAGCTCTCATTTCTAACAGTGCTACCTATGAGAAGAAAACATCATTCTCACAAGAAAAATATAGGCTTAAGAAACAAAAGAAATATTCACCCAGAGTGCTTTTGAGGCGCCCTTTTTGTCGGAGTATATGTGAGGCTTACTTCAAGAAATATCCAGCTAGAATCGGGTTCTTGCGAGTGGACACCTTGTCTCTTCTGCTTTCCATGGCTAATATTGCTGCTCATTCGGATGTTCTTGTAGTGGATATGGTTGGTGGTCTTCTTACTGGTGCTGTGGCAGAACGTTTAGGAGGTACAGGCTATGTCTGTAATGCATATCTTGGAGATACTCCGTACCCTATGGATATAGTGAGAATATTCAACTTCAGTAGTGAAATCTGCAAAAGAATAGTGCGGTCTCCTGTAGATGGACTCCGTTCAATTCAAGATGGTACTTCTGAGCAATTTTTTCAACATAAAGGTGTCTCTAACTCAGAAATTCAGTCAAATGAACAAATGTCTTCCCAGGATTCTTTTCCCCATTCAATTAGCACCGAAGAAACCACTCTTTCATCTGAAAATGGGATGCTGGATCTTATTCCTCAGATGGTGACTGCTTCTCCACCTCAGGTGGCCAAAACATGCAAAGCCACGAAAGCAGGAGAGAATGCATCCCTAGATGCCATTAACTTGTGGAAAGAAAATGGTTTTTCTAGCCTATTAATTGCTGCTCCAGAGCTGGATGTGTGGAGCATAGTTCAAGAATTCCTACCATTTTTATCATATTCAGCTTCCTTTGCAATTTATCATCAATATCTTCAGCCTCTTGCAACATGCATGCACAATCTACAACTTGGGAAAATGGCAATTGGCTTACAAATTTCAGAACCATGGCTACGTGAATATCAGGTTCTTCCATCAAGAACCCACCCATGCATGCAGATGAGTGCATTTGGTGGGTACATTCTAAGTGGGACAAGGATTTGCAGCAGTGACTCCCAGATCCAAAAGTAG 1395 0.4244 MSQNSLQNDSIQNPRVTWEGCSVLLDINDGDRLVFARLSASATLKIGNKNCSLQPLIGCPFGSLFQVDNGPRGPYLSRVTPSAEGNDLQETQDCQLKDEPKDNRAIVDNNKAQSLTGEDIDEMRRQGATGDEIVEALISNSATYEKKTSFSQEKYRLKKQKKYSPRVLLRRPFCRSICEAYFKKYPARIGFLRVDTLSLLLSMANIAAHSDVLVVDMVGGLLTGAVAERLGGTGYVCNAYLGDTPYPMDIVRIFNFSSEICKRIVRSPVDGLRSIQDGTSEQFFQHKGVSNSEIQSNEQMSSQDSFPHSISTEETTLSSENGMLDLIPQMVTASPPQVAKTCKATKAGENASLDAINLWKENGFSSLLIAAPELDVWSIVQEFLPFLSYSASFAIYHQYLQPLATCMHNLQLGKMAIGLQISEPWLREYQVLPSRTHPCMQMSAFGGYILSGTRICSSDSQIQK* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1215 464 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 9 463 IPR017423 GO:0030488|GO:0031515
Vvi18g1215 464 PIRSF TRM6 7 464 IPR017423 GO:0030488|GO:0031515
Vvi18g1215 464 MobiDBLite consensus disorder prediction 294 314 - -
Vvi18g1215 464 Pfam Gcd10p family 22 264 IPR017423 GO:0030488|GO:0031515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1215 K03256 - vvi:100252255 915.99