Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1213 ATGATTGGATCATTTCTTACTAGAGGACTTGTGATGGTCTTTGGCTATGCATATCCTGCATATGAATGCTTTAAAACCGTGGAAAAGAATAAACCAGAGATTGAGCAACTTCGTTTTTGGTGCCAGTATTGGATTTTAGTTGCTGCAATAACAGTCTGTGAGAGAATTGGTGATACTTTCATTTCATGGGTACCAATGTACAGTGAAGCAAAGTTGGCATTCTTTATATATCTATGGTATCCTAAAACAAAGGGAACAACATATGTTTATGATTCCTTCTTTAAGCCATATGTTGCAAAGCACGAGACAGAAATTGATCGCAACTTGTTGGAACTAAGGACTAGGGCTGGAGATGTTGCAGTTCTGTATTGGCAAAAAGCTGCAAGCTATGGCCAGACAAGAATTTTTGACATTTTGCAGTATGTTGCTTCACAGTCAACACCAAGACCACGTCCTGCTCAGCAACAAGGTCCTAGGGCTCGCCAAAAACCTGCTGCAGCAAATCGCCGGTCTGCTACTGCAACACAACCACCTCAAACAGAAGAACCACCATCTCCAACTTCTAGCACAACTTCAAGTCAGAACCAAGAGGAGGCAACCCAAGAAGAGCCGCCTCCATCACAGGAACCTAAAGAGGCAGCTCCACCAGCACCAACCTTGAATGCACAAAAAACAACTGTAACTCAACCCGCCACAGAAACCACCAGCCAATCAACATCAAATGGAGCAGAGGACATGCAGATCGAACCAGTCTCATCTTTGCCAAATGAAAATGCTAATCCTCAACCACCGGAGACTGTCATGGAAGAAACAATTCGGGTTACCCGAAGTAAATTCAGGAAAACCCGGTCCACGGTGAACCGCTGA 867 0.4406 MIGSFLTRGLVMVFGYAYPAYECFKTVEKNKPEIEQLRFWCQYWILVAAITVCERIGDTFISWVPMYSEAKLAFFIYLWYPKTKGTTYVYDSFFKPYVAKHETEIDRNLLELRTRAGDVAVLYWQKAASYGQTRIFDILQYVASQSTPRPRPAQQQGPRARQKPAAANRRSATATQPPQTEEPPSPTSSTTSSQNQEEATQEEPPPSQEPKEAAPPAPTLNAQKTTVTQPATETTSQSTSNGAEDMQIEPVSSLPNENANPQPPETVMEETIRVTRSKFRKTRSTVNR* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1213 288 MobiDBLite consensus disorder prediction 146 288 - -
Vvi18g1213 288 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
Vvi18g1213 288 PANTHER HVA22-LIKE PROTEINS 12 144 IPR004345 -
Vvi18g1213 288 MobiDBLite consensus disorder prediction 219 265 - -
Vvi18g1213 288 MobiDBLite consensus disorder prediction 185 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1213 Vvi-Chr18 12148320 12150412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1213 - K17338 vvi:100245445 483.026