Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1212 ATGCCAACCCCACACGCATATCCAAAACCATCCACTCAAACTCAAATGTCTCTCTCTTCCAATTCAGGCCTCCATTGGATTGGGGCTGAAAGCAAAACCAGCACGGCTGAGATGTCAATCGCACCTTCCCTTCCTCGCCTTCACTCTTCTTTCATATGCTGCCCTCTTAAGCTCTCTTCCCCTTCTCCCTCCTTGTCCCACAAATTCGCCAGAAATCGAAGGTCGCCAGCTTCCTATCCAAGAATTAGGGCTCTTGACCTCGATCAAAACACGATAGTGGCGATATCGGTGGGAGTTGTGAGCGTTGCCGTTGGGATTGGAGTCCCAATTTTCTATGAGACACAAATTGATAATGCTGCGAAGCGAGAGAACACTCAACCCTGCTTCCCTTGCGATGGATCGGGCGCACAGAGATGCAGGTTTTGCATGGGAACCGGCAATGTGACGGTAGTGCTTGGTGGAGATGAGAAAGAAGTCTCCCGATGCATTAACTGTGATGGTGCTGGTTCCTTGACATGCACTACATGTCAAGGCTCTGGTATTCAACCTCGGTACCTTGATCGCAGAGAATTTAAAGATGATGATTGA 588 0.4915 MPTPHAYPKPSTQTQMSLSSNSGLHWIGAESKTSTAEMSIAPSLPRLHSSFICCPLKLSSPSPSLSHKFARNRRSPASYPRIRALDLDQNTIVAISVGVVSVAVGIGVPIFYETQIDNAAKRENTQPCFPCDGSGAQRCRFCMGTGNVTVVLGGDEKEVSRCINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1212 195 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 60 191 - -
Vvi18g1212 195 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 123 182 IPR036410 -
Vvi18g1212 195 Pfam Family of unknown function (DUF5351) 139 170 IPR035272 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1212 K22520 - vvi:100267764 374.4