Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1211 ATGTTGTACATAATAGGCTTGGGCTTGGGCGATGAGAGAGACATAACGCTGAGGGGCCTGGAAGCTGTGAAGAAATGCAGCAAGGTCTTCATTGAAGCCTACACTTCTCTCCTCTCCTTTGGTCTTTCTTCCAATGGTCTTTCCACACTGGAAAATCTCTATGGGAAACCAATTACGCTTGCAGATAGAGAAATGGTGGAGGAAAAAGCGGATGATATTCTGTCCGATGCTCGTCACTCGGATGTGGGTTTCCTTGTTGTTGGTGATCCTTTTGGAGCTACAACACACTCTGATCTTGTTGTTCGAGCAAAGAAACTGGGGGTGGATGTCAAGGTGGTTCACAATGCATCAGTGATGAATGCAATTGGAATTTGTGGCTTACAACTTTACCGCTATGGGGAGACTATTTCCATTCCATTCTTCACTGAAACATGGAGACCTGACAGCTTTTATGAGAAGATCCAAAGAAATCGTGTGCTTGGATTGCATACCCTCTGCTTGTTGGATATACGTGTGAAGGAACCCTCGCTGGAATCTTTATGCAGAGGAAAAAAACAATATGAACCACCAAGATATATGACAATAAACACTGCCATTGAGCAGCTTTTGGAGGTTGAACAAATGCGTGGAGAATCTGCATTCTGTGAAGACACTGATTGTGTTGGTTTTGCCCGACTGGGAAGCGAGGATCAGATGATAGTTGCAGGCTCAATGAGGCAGCTGCTCAAGGTTGATTTTGGAGCACCTCTGCATTGTCTTGTCATAGTAGGCAAGACACATCCAGTGGAAGAAGAAATGCTGGATTTTTACAAACTTAAAGGAGAAAGTGCCGAGTCAAAACATAACCAGACTGCATGA 858 0.4429 MLYIIGLGLGDERDITLRGLEAVKKCSKVFIEAYTSLLSFGLSSNGLSTLENLYGKPITLADREMVEEKADDILSDARHSDVGFLVVGDPFGATTHSDLVVRAKKLGVDVKVVHNASVMNAIGICGLQLYRYGETISIPFFTETWRPDSFYEKIQRNRVLGLHTLCLLDIRVKEPSLESLCRGKKQYEPPRYMTINTAIEQLLEVEQMRGESAFCEDTDCVGFARLGSEDQMIVAGSMRQLLKVDFGAPLHCLVIVGKTHPVEEEMLDFYKLKGESAESKHNQTA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1211 285 CDD DHP5_DphB 1 259 IPR004551 GO:0004164|GO:0017183
Vvi18g1211 285 PIRSF Diphthine_synth 1 277 IPR004551 GO:0004164|GO:0017183
Vvi18g1211 285 SUPERFAMILY Tetrapyrrole methylase 1 272 IPR035996 GO:0008168
Vvi18g1211 285 Gene3D - 117 275 IPR014776 GO:0008168
Vvi18g1211 285 Gene3D - 1 116 IPR014777 GO:0008168
Vvi18g1211 285 PANTHER DIPHTHINE SYNTHASE 1 274 IPR004551 GO:0004164|GO:0017183
Vvi18g1211 285 FunFam Diphthine synthase putative 117 274 - -
Vvi18g1211 285 FunFam Putative diphthine synthase 1 116 - -
Vvi18g1211 285 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 1 241 IPR000878 GO:0008168
Vvi18g1211 285 Hamap Diphthine synthase [dphB]. 1 273 IPR004551 GO:0004164|GO:0017183
Vvi18g1211 285 NCBIfam diphthine synthase 1 268 IPR004551 GO:0004164|GO:0017183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1211 K00586 - vvi:100242000 562.762