Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1210 ATGGATGGTGAAGCTAATCATCAACCTAAGCAAGAAAGGTTGAGGACAAGGTGGACAACATCCCTTGATAAGATATTTGCTGACTTAGTAGTCAAACAGATTCAATTGGGAAACAGACCAAACAATGTTTTTGACAAGAAAACATGGAATCGTATACGTGATGAATTCAATGTGCAAACAGATCTCAACTTTAATAACAATCAATTGAGGAAGCACCTGGATGTTCTGCGGACTCGGTACTATAATCTCAAATCAGCTTTTGATCAAAATGAATATGCTATGGATGATTCTTGTTGCATTGGGTTTGACCTGTGGGAGGACATTGGGCCTCGGCCTGATACAATCAAAATTAAGGACTGCCCCATTTATGATCAGCTATGCATGATCTTTACAGAATCAGGGGCTGACGGGAAATATGCCCAGTCGAGTCACTATGAGGAGTTAGATGACAAGTCTGTTGGAATAGGTACTGCAATAGATACTTCTGGGTTAACTTCGTATCCAGAAAGTGGAAAACTGAGTTCCAAACCTTTGTCATCATCAAAAATTGCGCAAGAAAATGCTTCATTAGCAGAAAAGTTGGACAAGAAAACAGCAGAGAGAAAAAGGAAACGATCATCTGAGACTGGCTCTTTTTCAGGTCAAAATAAGGGAGGTAAAGGAATAAATGATGTGATGGCAGAAGCCATGCTAGAGATGGTTGCTGCTTCAAAGTTGAGGACAGTTACATCGATACAAACCGATGGCAAATATACTATCACTAATTGCATAAAGGCATTGGATGAGATACAGCGCATTGATCAAAAGATCTACTTTGCTGCTTTGGACCTGTTTGAGGACCCAAACTTGAGGGAGACATTTATTTCTCTTGGGGGTAATGAGACGCGGTTGACATGGCTGCTGGGAAAGTGTGGTAATGCTACCTCCAGTTAA 933 0.4073 MDGEANHQPKQERLRTRWTTSLDKIFADLVVKQIQLGNRPNNVFDKKTWNRIRDEFNVQTDLNFNNNQLRKHLDVLRTRYYNLKSAFDQNEYAMDDSCCIGFDLWEDIGPRPDTIKIKDCPIYDQLCMIFTESGADGKYAQSSHYEELDDKSVGIGTAIDTSGLTSYPESGKLSSKPLSSSKIAQENASLAEKLDKKTAERKRKRSSETGSFSGQNKGGKGINDVMAEAMLEMVAASKLRTVTSIQTDGKYTITNCIKALDEIQRIDQKIYFAALDLFEDPNLRETFISLGGNETRLTWLLGKCGNATSS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1210 310 PANTHER - 6 303 IPR045026 -
Vvi18g1210 310 Pfam Myb/SANT-like DNA-binding domain 17 95 IPR024752 -
Vvi18g1210 310 MobiDBLite consensus disorder prediction 194 208 - -
Vvi18g1210 310 MobiDBLite consensus disorder prediction 194 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1210 Vvi-Chr18 12134220 12135277 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1210 - - vvi:100854357 610.527