Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1209 ATGATGCATCAGATGGATGAAGATCAATCTAGGGCGAAGTGGAGTACATCACTTGAGAAGATATTTGTGGAATTGATGCTTGAGCAAGTTCTACAGGGGAATAGATCAAACAATTCTTTTAGTAAGAAAGCATGGAATTATATATGTGATGAATTTAATAGACAAACAGGGTTAAATTTTCATAAGCAGCAACTGAAGAACCGCCATGGTGTTTTGAGGAGACTGTACAATAGTCTGAAGTTACTCCTTGATCAGGATGGCTTTAGCTGGGATGAGTCCCGGGGTCTGGCAATTGCTGAGGATGAAGTGTGGGCAAAATATATTGAGGAGCATCCTGAAGTTGAGTCAATAAGATTCAAAGGTTGTCTAGTGTATGAACAGTTACACGGAATATTCTCAGACCTAGAAAGTGATGGAAAATCTGCTTTTGCTGCTACTACCCAGATGGATGATCTACCTAGTCAAGATCAATCAAAGCTAGATCAGTCTCGGGCAAAGTGGATGCCATCCTTGGATAAGATATTTGTAGACTTGTTGGTTCGGAAGAATCAACAAAATTGTGTTTCTAACAAGAAAGCATGGAAGGGCATACGGGAAGAATTCAATAAGCAGACAGGTTTAAATTTTGAAGAGCAACAATTGAGGAACCATCAAAGTGTTCTTAGGAGGTGGTATAATAATATAAATTCCCTTCTTTATCAAGCTGGCTTCAGTTGGGATGAATCCAAGCACATGGTAATGGCTGATGGGAAAACATGGGAAAATCACATCAAGGCATATCCCGAGTGTGAAACAATCAGAAACAAGGAATGCCCAATTTTCAAACAGCTATGCCTCCTGTTCTCAGGGTCCGAAGCTGAAGGCAGATATGTTCAATCAGGTCATGACTTTGAGTTGGATCATGAAATAGTTACAGCAAATGCTCCCGAAGCTGCCAGCATGTCTGCTGAACCAGTAGCAGACGAGGCATCCTCACAGCCGGGAGATGACATGAACATACCAGATGGATGGAATAAGCGCAGGATTACAACATTAAATCAATGTTTCCAGAGGAGAACCCATACAGAAGCCAGTCACAATGTTGAAGATGCAGTGTTAGAGACAGCTTGCAGGAGGAAAAAGAGGGCATCAATGCTGTCACAGAGAAGTGACCAGTTTTCAATATCCAGTTGCATTAAAGTATTGAACGAGATGGAAGGAGTTGAGGAGGATCTCTATTTGGCCGCATTGGATTTGTTTCAGGACCCTGACCGAAGGGAAACATTCATATCCATTAGAAGTGATATCAGAATGCCATGGCTGAAGGGAAAGTGTAGTTCTATGTCATAG 1329 0.4153 MMHQMDEDQSRAKWSTSLEKIFVELMLEQVLQGNRSNNSFSKKAWNYICDEFNRQTGLNFHKQQLKNRHGVLRRLYNSLKLLLDQDGFSWDESRGLAIAEDEVWAKYIEEHPEVESIRFKGCLVYEQLHGIFSDLESDGKSAFAATTQMDDLPSQDQSKLDQSRAKWMPSLDKIFVDLLVRKNQQNCVSNKKAWKGIREEFNKQTGLNFEEQQLRNHQSVLRRWYNNINSLLYQAGFSWDESKHMVMADGKTWENHIKAYPECETIRNKECPIFKQLCLLFSGSEAEGRYVQSGHDFELDHEIVTANAPEAASMSAEPVADEASSQPGDDMNIPDGWNKRRITTLNQCFQRRTHTEASHNVEDAVLETACRRKKRASMLSQRSDQFSISSCIKVLNEMEGVEEDLYLAALDLFQDPDRRETFISIRSDIRMPWLKGKCSSMS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1209 442 Pfam Myb/SANT-like DNA-binding domain 13 107 IPR024752 -
Vvi18g1209 442 Pfam Myb/SANT-like DNA-binding domain 166 256 IPR024752 -
Vvi18g1209 442 MobiDBLite consensus disorder prediction 311 336 - -
Vvi18g1209 442 PANTHER - 155 437 IPR045026 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1209 Vvi-Chr18 12117116 12118772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1209 - - vvi:100259109 899.812