Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1205 ATGTCTCTCAGCATTAGGCTCCACATCAGTTCCAACCTCAGCCTCAACTTCCACCCCCAAACCACAATCAGAAGAACCAATCACTCTACTTCAATCCGACCCAGACCCATTTACCATTCGAACCCCTTAGCCCCCGCTCTTCTTCGCCGCGCCATGTCTGCGATTCCTTCACATAAATCTTCTTCTTCTTCTACAATCAAGAGCTCTCTGATTGAGCCGGATGGCGGTGCTTTGGTGGATCGGGTGGTGCCTGAGAGCGAGCGGGCCGCGAAGGCTCTGGAGGCGGAGTCAATGCCGAAGGTGGGGCTGACCCAGATCGATTTGGAATGGGTTCATGTGATTAGTGAGGGATGGGCAAGTCCGCTGAAAGGGTTCATGAGGGAAGATGAGTATTTACAGAGCTTGCATTTCAATTGTATCAGGATGAAGGATGGGACTATTGTGAACATGTCGCTTCCCATTGTTTTGGCTATTGATGATGAGGCCAAGGAGCGAATCGGGGCATCGCAGGACGTGGGGTTGGTTGGCCCCACTGGTGATTTGGTTGGTATACTTCGAAGCATTGAAATATACAAGCATAACAAAGAAGAAAGAGTTGCCAGAACATGGGGAACAACTGCTCCAGGATTACCTTATGTTGAAGAGGTAATTACTCCAGCTGGAAATTGGCTCATCGGTGGAGATCTGGAAGTGTTGAAGCCCATCAAATATAATGATGGTCTTGACCACTATAGGCTGTCACCCCAACAACTCCGTAAAGAATTTGATAAGCGGCAGGCCGATGCAGTTTTTGCTTTTCAGCTGAGGAACCCTGTCCATAATGGGCATGCTTTGTTAATGAATGACACACGCAGGCGACTTTTGGAAATGGGATACAAGAATCCTATATTATTGCTTCATCCTCTTGGAGGTTACACAAAGGCAGACGACGTGCCCTTGGATGTTCGAATGGAACAACATAGCAAGGTCCTAGAAGATGGAGTCCTTGATCCTGAAACTACCATTGTGGCTATATTCCCATCACCTATGCATTATGCAGGCCCAACTGAAGTACAATGGCATGCCAAGGGACGGATAAATGCAGGTGCTAATTTCTATATTGTAGGTCGTGATCCTGCTGGTATGGGTCACCCAACAGAGAAGAGGGATTTGTATGACCCTGACCATGGGAAAAAGGTGTTAAGCATGGCTCCTGGCTTGGAGAAGCTAAATATTCTGCCATTCAGGGTTGCAGCATATGACACAGTGGGAAAGAAGATGGCCTTTTTTGATCCTTCACGTGCTAAGGATTTTCTCTTCATTTCAGGAACCAAGATGCGGACTTATGCAAGAAACGGTGAGAACCCTCCTGATGGTTTTATGTGCCCCCAGGGATGGAGTGTCCTTGTCAGATACTATGAGAGTTTGCAAGCAGAAGATACCACACAGCAATCAGCTGTTGTATCTGCTTAG 1452 0.4752 MSLSIRLHISSNLSLNFHPQTTIRRTNHSTSIRPRPIYHSNPLAPALLRRAMSAIPSHKSSSSSTIKSSLIEPDGGALVDRVVPESERAAKALEAESMPKVGLTQIDLEWVHVISEGWASPLKGFMREDEYLQSLHFNCIRMKDGTIVNMSLPIVLAIDDEAKERIGASQDVGLVGPTGDLVGILRSIEIYKHNKEERVARTWGTTAPGLPYVEEVITPAGNWLIGGDLEVLKPIKYNDGLDHYRLSPQQLRKEFDKRQADAVFAFQLRNPVHNGHALLMNDTRRRLLEMGYKNPILLLHPLGGYTKADDVPLDVRMEQHSKVLEDGVLDPETTIVAIFPSPMHYAGPTEVQWHAKGRINAGANFYIVGRDPAGMGHPTEKRDLYDPDHGKKVLSMAPGLEKLNILPFRVAAYDTVGKKMAFFDPSRAKDFLFISGTKMRTYARNGENPPDGFMCPQGWSVLVRYYESLQAEDTTQQSAVVSA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1205 483 FunFam ATP sulfurylase 2 69 237 - -
Vvi18g1205 483 NCBIfam sulfate adenylyltransferase 73 463 IPR002650 GO:0000103|GO:0004781
Vvi18g1205 483 Gene3D HUPs 238 471 IPR014729 -
Vvi18g1205 483 CDD ATPS 98 465 IPR002650 GO:0000103|GO:0004781
Vvi18g1205 483 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 96 470 - -
Vvi18g1205 483 Gene3D Sulfate adenylyltransferase 69 237 - -
Vvi18g1205 483 FunFam bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 238 471 - -
Vvi18g1205 483 Pfam ATP-sulfurylase 243 465 IPR024951 GO:0004781
Vvi18g1205 483 SUPERFAMILY Nucleotidylyl transferase 243 466 - -
Vvi18g1205 483 Pfam PUA-like domain 71 233 IPR025980 -
Vvi18g1205 483 SUPERFAMILY PUA domain-like 73 237 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1205 Vvi-Chr18 12005013 12013765 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1205 K13811 - vvi:100252345 957.592