Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1194 ATGGGAGCATCGTCTTCGACACAGCAGGTTTCGACTGAACAACGGGAGGCCGAAACCCTAGCAGCTTCGACTGGAGCTCTTCCAATGCTTCAGAAGTCTTTCTCTAGGCTTTCTAATCCCGAAACTAAAGCGATTCCCCTGACATCTCTGCAGGAATGCTTCTGTATAGCTTTCAACAATGCAAAGTGTGAAGCACCTTATGTTCCTGACTACGTCTTGCAGTTGTTGGATCAACTGGGTCCATCCATAGTTGACCTATTTTTTGTGGCAGAAAAAGGAGGGATAAGTTGGGTTGAGTTTGTGAGGGGTTATACTAAATGCTGTGGGAGGATGTCAGCTGCAATGTCCCTTGGTGCTTTGTTGAGGGTTTTTTCAGTTACGACTGTGAAAGTGGGCATGCCTTCAAAATTGCAGTTTGAATCTGATGATGCTGATTGTAAGATAAGTGGCTCCCTCCAGCCAAATGAGTTGCTTGTGCTTCTTTGGATGTGTTGGATTATGACGTGGAGTTCTAGAATCTCCAAATTCTCCAATGGAAAACTGAATCTGGATCTTCCGGATATAAATAATTTAGTATTATCAGCTATTGTGTCATGTACAGAAGTTGGCAGTGACTTGAATTTATGGGATTGTGATATCACAAGATTGGAAGTGCAACTTCCTGCAGGAAAAATTCATACCTGGGCCTTGAATACAGTGCCAAATCTTGCAGATTGTTTTGTGCATTTTGTCCATGTTAAACTCCAAAACACTGCAACTTCAGAGAGTGAGATGGAGGCCTCAAGTTCATCAGTAAGTGATGTTTCCTCAGCAAAATCATGTGATGCTCATCTTCTAACTTGTGGGAGGGCGTGGGCTATTTCCCTATCACCGAGAAGTACTATAGGTCAAGAGATTTTAAGAGTATGTTTCCCTAGAGATGGGGAAGGATCAGAGGAAAGCCTTCTTTATCGGTCATCACTTCATGGGAAAGGTTTGAACAGATTCTGGTCAAATATTGAGGGTTATCATGGCCCAATGTTAATGTTGATTTCTGCCAGTTCAGGAAATTCTGAGGGTAGCACCAATTCCAGGAGATGGATCATTGGTGCACTTACTCAGCAGGGTTTCGAAAATAAGGATATGTTTTATGGAAACTCTGGGAATCTATATGCTATAAGTCCAGTTTTCCATTCATTTTCACCTTCTGGGAAGGAGAAGAACTTTGTGTATAGTCATTTACATCCTACTGGTAGGGCATATGAGCCACATCCAAAGCCTGCGGGGATTGCATTTGGTGGAACCATTGGGAATGAGAGAATATTTATTGACGAGGATTTTGCTAGAGTTACTGTTCGCCATCATGCAGTTGACAAAACTTATCAACCTGGTTCCCTCATCCCTGATCAGGGGTTTTTACCTGTTGAAGCACGGGTTTTAGATGTGGAAGTATGGGGATTGGGTGGAAGAACAGCCAGGGAAGTACAAATCTCATTTCAGAAGAGAGAACAACTTTTTACTGAGCAAAGACGCAAGGTTGACTTGAAAACATTTGCGAGTTGGGATGATTCACCTGAGAAGATGATGATGGATGTTATGTCTGATCCTAACAGAGTTAATCGGGAGGACCGCTAA 1614 0.4275 MGASSSTQQVSTEQREAETLAASTGALPMLQKSFSRLSNPETKAIPLTSLQECFCIAFNNAKCEAPYVPDYVLQLLDQLGPSIVDLFFVAEKGGISWVEFVRGYTKCCGRMSAAMSLGALLRVFSVTTVKVGMPSKLQFESDDADCKISGSLQPNELLVLLWMCWIMTWSSRISKFSNGKLNLDLPDINNLVLSAIVSCTEVGSDLNLWDCDITRLEVQLPAGKIHTWALNTVPNLADCFVHFVHVKLQNTATSESEMEASSSSVSDVSSAKSCDAHLLTCGRAWAISLSPRSTIGQEILRVCFPRDGEGSEESLLYRSSLHGKGLNRFWSNIEGYHGPMLMLISASSGNSEGSTNSRRWIIGALTQQGFENKDMFYGNSGNLYAISPVFHSFSPSGKEKNFVYSHLHPTGRAYEPHPKPAGIAFGGTIGNERIFIDEDFARVTVRHHAVDKTYQPGSLIPDQGFLPVEARVLDVEVWGLGGRTAREVQISFQKREQLFTEQRRKVDLKTFASWDDSPEKMMMDVMSDPNRVNREDR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1194 537 ProSiteProfiles TLDc domain profile. 298 481 IPR006571 -
Vvi18g1194 537 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 201 480 - -
Vvi18g1194 537 SMART 109ultra 292 481 IPR006571 -
Vvi18g1194 537 Pfam TLD 315 481 IPR006571 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1194 - - vvi:100248967 1068.91