Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1169 ATGGCCATTCATGCCCTCCAAGGAGAAGAGTTTGTGGCTAGCATTGCTTTGATTTCTTTATGGGCACAGCTTCTGAGTTTGGGTAGCAGTTTGTTTCGTTTGTTCCTGAGATTGCCGGGTTATTATGCTCAAAAAGAGAAGAAGAGGCCTCCTGAGAGTGAGGGGCTTGAGGGAGAGGATAACGGCTCTCACTCTCCATTAGGTGATTCAGTGGGTGCAGAGATTGAAAAGACAGAGAATGAAACTCCAAAGGGGAAAGCTGGAGCTTCGGATGACCTTGAGTCCAAGGAAGTGGAGATGGATGGTTGGCTCTTTGGATTTACTCAACGGTTCAGAACCCATGTTGGTATTGACCCAGATGTTCACACTGACCTACATGAGTTTGGGATGGGGCTCTGTTCTGAAGCTCTCGAGGAGACAATGACAAGGTTGAAATAA 438 0.4703 MAIHALQGEEFVASIALISLWAQLLSLGSSLFRLFLRLPGYYAQKEKKRPPESEGLEGEDNGSHSPLGDSVGAEIEKTENETPKGKAGASDDLESKEVEMDGWLFGFTQRFRTHVGIDPDVHTDLHEFGMGLCSEALEETMTRLK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1169 145 MobiDBLite consensus disorder prediction 44 94 - -
Vvi18g1169 145 MobiDBLite consensus disorder prediction 44 59 - -
Vvi18g1169 145 PANTHER PROTEIN CLMP1 76 142 IPR044517 -
Vvi18g1169 145 MobiDBLite consensus disorder prediction 74 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1169 Vvi-Chr18 11650305 11650904 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1169 - - vri:117923449 159.458