Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1165 ATGGCGGAAGAGATGACTAAGGCGGAGCTTGGATCCTCCTCCTCAACTACTAAATCCAGATCTTTGTGGCCTTCTCTTTTCCGTTGGATCCCTACCTCTACCGATCATATCATCGACGCCGAAAAGCGTCTTCTCTCCTTAGTCAAGACTCCTTATGTTCAAGAACAGGTTAATATAGGGTCTGGGCCACCTGGGTCCAAAGTCAGGTGGTTTCGGTCTGCCAGCAATGAACCAAGGTTTATCAACACAGTTACTTTTGACAGCAAAGATGATTCTCCTACTCTTGTAATGGTTCATGGATATGGTGCTTCTCAAGGTTTCTTTTTCCGGAATTTTGATGCTCTTGCTAGACGATTCAGGGTCATCGCCATTGATCAACTAGGTTGGGGTGGATCAAGCAGGCCTGACTTCACTTGCAAAAGTACCGAAGAGACTGAGGCTTGGTTCATTGATTCCTTTGAGGAGTGGCGTAAAGCCAAAAACCTTAGCAACTTTATATTGCTTGGGCACTCTGTCGGGGGCTATGTTGCAGCTAAATATGCTCTCAAGCATCCTGAGCACATTCAGCACTTGATTTTGGTGGGACCTGCTGGATTTTCATTGGAATCAGATGGTAAGTCAGAGTGGCTTACACGGTTCAGAGCAACATGGAAAGGAGCTGTTCTGAACCATTTGTGGGAATCTAATTTTACTCCTCAGAAGCTTGTCAGAGGTATTGGCCCTTGGGGTCCAGATCTTGTACGCAAGTATACAAGTGCTAGATTTAGTTCATATTCAACTGGTGATTTGTTAACTGAAGAGGAGTCCAAGTTACTCACAGATTATGTGTACCATACTGTAGCAGCCAAAGCTAGTGGAGAGCTGTGCTTGAAATACATATTTTCATTTGGAGCATTTGCTCGGTTGCCCCTTCTGCACAGCGCATCAGAATGGAAAGTGCCAACCACTTTTATATATGGCTTTGAAGATTGGATGAACTACCAAGGAGCCCAAGAAGCTCGCAAGCAAATGAAGGTCCCATGTGAAATTATTAGGGTCCCCCAGGCTGGGCATTTTGTATTCATAGACAATCCCTCTGGGTTCCACTCGGCTGTATTGTATGCTTGCCGCAGATTTCTCTTGCCTGACCCTGATAGTCAATCCCTTCCTGAAGGCTTGACATCTGCCTAA 1170 0.4547 MAEEMTKAELGSSSSTTKSRSLWPSLFRWIPTSTDHIIDAEKRLLSLVKTPYVQEQVNIGSGPPGSKVRWFRSASNEPRFINTVTFDSKDDSPTLVMVHGYGASQGFFFRNFDALARRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSVGGYVAAKYALKHPEHIQHLILVGPAGFSLESDGKSEWLTRFRATWKGAVLNHLWESNFTPQKLVRGIGPWGPDLVRKYTSARFSSYSTGDLLTEEESKLLTDYVYHTVAAKASGELCLKYIFSFGAFARLPLLHSASEWKVPTTFIYGFEDWMNYQGAQEARKQMKVPCEIIRVPQAGHFVFIDNPSGFHSAVLYACRRFLLPDPDSQSLPEGLTSA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1165 389 PRINTS Alpha/beta hydrolase fold signature 118 133 IPR000073 -
Vvi18g1165 389 PRINTS Alpha/beta hydrolase fold signature 167 180 IPR000073 -
Vvi18g1165 389 PRINTS Alpha/beta hydrolase fold signature 181 194 IPR000073 -
Vvi18g1165 389 Pfam alpha/beta hydrolase fold 93 358 IPR000073 -
Vvi18g1165 389 Gene3D alpha/beta hydrolase 79 369 IPR029058 -
Vvi18g1165 389 PANTHER RE40534P-RELATED 26 367 - -
Vvi18g1165 389 SUPERFAMILY alpha/beta-Hydrolases 82 366 IPR029058 -
Vvi18g1165 389 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 79 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1165 Vvi-Chr18 11613829 11619992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1165 73 201 Acyl Lipid Metabolism Gene Families AT1G64670 31.884 3.94e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1165 - - vri:117906652 797.734