Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1160 ATGGGGAAGAAGAAGTTCATCGACAAGAAAAAATCCGCAACATTCCAGTTACTCGCTCGCGACTCATCCGATCCCAATTACCAAGATTCACCAGGTCATGATCGAGTCTTCATTAGGGTTGACAACAATCCATATTCAGTCGACGGTATCTTCCACGAAAGCGACGACCTTTCTGGGCCTAGCCATTACGCCGACGACCCTGATTCTATCTTCGCCGACGCACCCGACGACGACAACGACGGCGAAGAAGATGATCGGGTTTTTGGGAAGCAGAGTTCATCGCAGCTGTCAATTGGTGCGACGGCGGCGGCGGTGCCGTTGCCGGATCATGTGAGGAGAGAGATTTTGGAGCTAGGGTTTCCTGATGATGGCTATAACTATTTGACTCATTTAAGGGAGATCAAGAATACTGGAGGCGGTTCGGCGTTTTATCATAACAGTAAGGCCAGGCTTGATCAGCTTCCCCTTGATGTCAAGGGATATGATGCTTCAAGAGTTCATATTGGAGATGTGAAAAGAGACCCGGATGAGAAGGCCCTTTACAGTGTTGCAGAGAAGACTGTCGGTGTGAGGCTTCAGAAAGCAGTTGATCCTGAAGTGGCTGCATTGTTAGATTCCAAGGATTCTGTGTTTGGTTCTGATGTAGAGGATTTGGAAGAGGATTTTGTTATTCAGGCTAATATTCATGAAGAAGGGAAGGATGATTTCATTGGTAAGAAATTAACAAAAGAAGATGTCGATGAATCTTACACCCAAGAACCACAAGAAGACCCGGTTGAATTTGTTGGTCATGATGAAATAAGAAACCAATTTGTAGGAGCTGGAGATGACATTATTATTAGCGAGGAGCCAAGAGTTCACCGTCTTTTGGATGAGCAATTTGATCAGCTTGAGCGTATGGAATATGGCACAGAAAGTGATGATGATTATGGTGGTTCTGTAGCTGAGGATTATGAATCTCTTGCAGACAAGCTAAATCATGCTCTTAAGGACCATGCGACAGATGACTTGGAACTTAATGAAAAATATAGGGTTCCTGCAGATTTATTGCATGACAAAGAGGGACTAAAAGATTCAGGGTCATTGGACTCATCTGCTGATGTGATTCGTCGTTGTGTGGAATATGCTGAAAAGTATGAAAATGAAGACCCAAATGAAGATGTTGTTGTTCTAGAGGAAAGTAGTGATGAATCCGGAGGGTGGGATTGTGAAACTATTGTTTCTACATATTCAAATCTTGATAATCACCCAGGAAAAATTGAAGCCCCAGAAATAACTAGAAAGAAAAAGTTGGTTGAAACTGTCTCTGGACCCTTAAGTGCCACCAATCATGTAATACCCCTTCGAGGGAAAGAGAAGCTCCCTGTTGACTTTTTGCCTCGTGGTAAAAAACCTTCTACAGAGAAGGCTAAGGATGTGAGTAGCCTGAGAGCTGAGCAGCAGAAGAGGAAGAAACATGGTCAGGAGGAAAAGAAAGAAAAGAAAGAACGAAAGACTGCTGTAAAAGAGGAACGGCGAGAGGCACGGCGTGTGAAAAAGGAAACAAAGGAGATGTACAAGTCTGAAACCCAGCGTGCTCAAAGAGTTGCTGCTATTTCTGGCCCATCTTCAATTCATCTTTCGTAA 1626 0.4391 MGKKKFIDKKKSATFQLLARDSSDPNYQDSPGHDRVFIRVDNNPYSVDGIFHESDDLSGPSHYADDPDSIFADAPDDDNDGEEDDRVFGKQSSSQLSIGATAAAVPLPDHVRREILELGFPDDGYNYLTHLREIKNTGGGSAFYHNSKARLDQLPLDVKGYDASRVHIGDVKRDPDEKALYSVAEKTVGVRLQKAVDPEVAALLDSKDSVFGSDVEDLEEDFVIQANIHEEGKDDFIGKKLTKEDVDESYTQEPQEDPVEFVGHDEIRNQFVGAGDDIIISEEPRVHRLLDEQFDQLERMEYGTESDDDYGGSVAEDYESLADKLNHALKDHATDDLELNEKYRVPADLLHDKEGLKDSGSLDSSADVIRRCVEYAEKYENEDPNEDVVVLEESSDESGGWDCETIVSTYSNLDNHPGKIEAPEITRKKKLVETVSGPLSATNHVIPLRGKEKLPVDFLPRGKKPSTEKAKDVSSLRAEQQKRKKHGQEEKKEKKERKTAVKEERREARRVKKETKEMYKSETQRAQRVAAISGPSSIHLS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1160 541 MobiDBLite consensus disorder prediction 456 541 - -
Vvi18g1160 541 PANTHER LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED 1 540 IPR007307 GO:0042274
Vvi18g1160 541 Pfam Low temperature viability protein 8 254 IPR007307 GO:0042274
Vvi18g1160 541 Coils Coil 477 518 - -
Vvi18g1160 541 MobiDBLite consensus disorder prediction 456 523 - -
Vvi18g1160 541 MobiDBLite consensus disorder prediction 49 90 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1160 K14798 - vvi:100247237 982.63