Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1150 ATGGCCAGCACTCAATCCGAGATCGAGATTGTGGTCGACGCATCCCCCGTTGCTGCGCAAGAACACCGTCGCCTCTTCATCATCGTCGCAAAACGATCCATATCGTCCGTCTTAACCAGGTTCCATGCAGGTTACTTCAGAATAAGTCTCTCTCTGGGAGGTCAAACCTTGCTATGGAAGACGCTTATCGATCCATCTCATGGCTCAAACCCTCCTTGGCGTCTGCTCCAAACACTCCCTCCCCTGTGTTTCATTCTCTTGTGGTCTCTGGCACTCTTCACTAATGTTTTACTCTCTCTTCTATACATTTCCAGATGCTTCTTTCGATTTCGCATGGTGGAGGCAGAGTTCTTGCACCATGTTGGGGTTAACTACTTTTTTGCCCCCTGGATTTCGTGGTTCCTCCTGCTCCAATCTGCCCCTTTCGTTGCTCCAAATACAGTTTCCTATCTGGTTCTGTGGTGGGTTTTCGCAGTTCCGGTCGTGACGCTGGACGTGAAAATCTACGGACAGTGGTTTACCAAAGGAAAGCAGTTTCTGACCCTGGTGGCGAATCCGACGAGTCAGTTGTCGGTCATCGGAAACCTGGTAGGGTCACGAGCGGCAGCTCAGATGGGGTGGAAAGAGAGCGCTGTTTGCTTGTTCTCGCTTGGAATGGTTCACTACTTGGTGCTTTTTGTAACTCTTTACCAGAGATTGCCCGGAGGCGACCGTCTCCCGGCGACTCTGCGGCCGGTTTTCTCTCTGTTCGTTGCAGCGCCGAGCATGGCGAGCTTGGCTTGGGAATCCATAGCTGGACGCTTCGATACGGCATCGAAGATGCTGTTGTTTCTGTCGCTGTTCCTCTTCGCGTCTCTGGTAATGTTAACTGGCTTGAAAATTAGGATTAAGAAAGCGACGTTGTTTGAAAGTATTTTAAGTAGGGACTCGCCGATTCATTGA 942 0.5053 MASTQSEIEIVVDASPVAAQEHRRLFIIVAKRSISSVLTRFHAGYFRISLSLGGQTLLWKTLIDPSHGSNPPWRLLQTLPPLCFILLWSLALFTNVLLSLLYISRCFFRFRMVEAEFLHHVGVNYFFAPWISWFLLLQSAPFVAPNTVSYLVLWWVFAVPVVTLDVKIYGQWFTKGKQFLTLVANPTSQLSVIGNLVGSRAAAQMGWKESAVCLFSLGMVHYLVLFVTLYQRLPGGDRLPATLRPVFSLFVAAPSMASLAWESIAGRFDTASKMLLFLSLFLFASLVMLTGLKIRIKKATLFESILSRDSPIH* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1150 313 Gene3D - 34 303 IPR038665 -
Vvi18g1150 313 PANTHER S-TYPE ANION CHANNEL SLAH3 27 289 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vvi18g1150 313 FunFam S-type anion channel SLAH1 35 302 - -
Vvi18g1150 313 Pfam Voltage-dependent anion channel 41 290 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1150 Vvi-Chr18 11503598 11504539 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1150 - - vvi:100266155 565.074