Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1141 ATGGGAATTGGATGGAACTATGCTGGTTTTGTTCTTCTTGTGGTTTTTCTCTTGGATGCTGGAGACTTTTGTGATGGTGGGGTGACAAGTAGTTTTGTTAGAACAAAAAACATATCTGCTGATATGCCATTAGACAGCGATGTGTTCCAAGTGCCTCCTGGTTATAATGCCCCTCAACAGGTTCACATAACACAAGGGGATTATGAGGGGAATGCCGTGCTTGTGTCTTGGACCACTCCAGATGAGCCAGGTTCAAGTACTGTTCTTTACTGGGCTGAAAATAGCAAGACCAAGAGTCATGCCAAGGGCATTGTTCTTACCTACAAGTACTTCAATTACACTTCTGGATACATACATCACTGCACCATCAAGAACTTGACGTTTGACACAAAATATTACTATGAGGTTGGAATTGGGAATTCTACACGACAATTCTGGTTTGTAACTCCTCCCAGAGCTGGCCCTGATGTTCCCTACACTTTTGGTCTCATAGGGGATCTTGGTCAAACTTACCATTCAAATAGAACACTTACTCACTATGAGTTAAGCCCAATTAAAGGACAGACAGTATTGTATGTTGGGGACCTGTCGTATGCTGATGACTATCCATTCCATGACAACGTCAGATGGGATACATGGGGAAGATTTACAGAGAGAAGTGCTGCTTATCAACCTTGGATTTGGACTGCAGGAAATCACGAAATAGATTTTGCTCCTGATCTTGGTGAATCCAAGCCATTTAAGCCTTATACAAACCGTTACCATGTGCCATTTTTAGCATCAGCTAGTACATCTCCATTATGGTACTCAATCAAGAGAGCTTCAGCATATATCATTGTCATGTCATCTTACTCTGCATATGACAAATACACTCCTCAATACAAATGGCTTGCAAATGAGCTACTCAAAGTGAACAGGACTGAAACACCATGGCTTATTGTTCTTATTCATTGTCCAATATATAATAGCTACATACATCATTATATGGAAGGGGAAACCATGAGAGTGATGTATGAGGCATGGTTTGTGGAATACAAAATTGATGTTGTCTTTGCTGGTCATGTTCATGCCTACGAACGATCGGAACGCATATCCAACATTGCTTACGATATCGTAAATGGGAACTGCACTCCCATACCTAACGAATCTGCTCCTGTTTACATAACCATTGGAGATGGAGGAAATCAGGAAGGATTGGCGACTGGCATGACAGAGCCGCAGCCAAGCTACTCAGCTTATCGTGAAGCCAGTTTTGGTCATGGCATTCTGGATATTAAAAACAGAACCCATGCTTATTTTGGTTGGAATCGTAATCAGGACGCATATGCTGTAGAAGCTGATTCAGTATGGCTTCAAAACAGATACTGGACCTCTTCAGAAAAATCCTCTATAGCCTCATCATGA 1404 0.4174 MGIGWNYAGFVLLVVFLLDAGDFCDGGVTSSFVRTKNISADMPLDSDVFQVPPGYNAPQQVHITQGDYEGNAVLVSWTTPDEPGSSTVLYWAENSKTKSHAKGIVLTYKYFNYTSGYIHHCTIKNLTFDTKYYYEVGIGNSTRQFWFVTPPRAGPDVPYTFGLIGDLGQTYHSNRTLTHYELSPIKGQTVLYVGDLSYADDYPFHDNVRWDTWGRFTERSAAYQPWIWTAGNHEIDFAPDLGESKPFKPYTNRYHVPFLASASTSPLWYSIKRASAYIIVMSSYSAYDKYTPQYKWLANELLKVNRTETPWLIVLIHCPIYNSYIHHYMEGETMRVMYEAWFVEYKIDVVFAGHVHAYERSERISNIAYDIVNGNCTPIPNESAPVYITIGDGGNQEGLATGMTEPQPSYSAYREASFGHGILDIKNRTHAYFGWNRNQDAYAVEADSVWLQNRYWTSSEKSSIASS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1141 467 Pfam Calcineurin-like phosphoesterase 160 358 IPR004843 GO:0016787
Vvi18g1141 467 SUPERFAMILY Purple acid phosphatase, N-terminal domain 39 151 IPR008963 GO:0003993|GO:0046872
Vvi18g1141 467 Pfam Purple acid Phosphatase, N-terminal domain 58 147 IPR015914 GO:0003993|GO:0046872
Vvi18g1141 467 PANTHER ACID PHOSPHATASE RELATED 14 452 IPR039331 GO:0003993
Vvi18g1141 467 Gene3D - 154 463 IPR029052 -
Vvi18g1141 467 Pfam Iron/zinc purple acid phosphatase-like protein C 384 441 IPR025733 -
Vvi18g1141 467 CDD MPP_PAPs 155 453 IPR041792 -
Vvi18g1141 467 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 154 462 - -
Vvi18g1141 467 ProSiteProfiles Fibronectin type-III domain profile. 57 152 IPR003961 GO:0005515
Vvi18g1141 467 CDD FN3 56 136 IPR003961 GO:0005515
Vvi18g1141 467 SUPERFAMILY Metallo-dependent phosphatases 153 459 IPR029052 -
Vvi18g1141 467 Gene3D - 57 153 - -
Vvi18g1141 467 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 57 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1141 Vvi-Chr18 11355233 11359410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1141 116 441 Miscellaneous Gene Families AT1G13900 26.273 3.92e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1141 K22390 - vvi:100247127 993.03