Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1140 ATGGGAATAAGATGGTATTGTGCTGGTTTTTTTCTTCTTGTGGTCGTCGCCTTGGATGCGGGATACTTTTGTGATGGTGGGGTAACAAGTAGTTTTGCTAGAACCAATAACATATCTGCTGATATGCCATTAGACAGTGATGTGTTCCGAGTGCCTCCTGGTTATAATGCCCCACAACAGGTTCACATAACACAAGGAGATTATGAGGGGAATGCCGTGATCATATCTTGGATCACTCCAGATGAACCGGGTTCAAATACTGTTCTCTACTGGGCTGAAAATGGCAAACACAAGAGTCATGCCAATGGCATTGTTCTTACCTACAAGTACTTCAAGTACACTTCTGGATATATACATCACTGTACCATCAGGAATTTGGTATTCGATACAAAATATTACTATGAGGTTGGGATTGGGAATACTACACGACAGTTCTGGTTTGTAACTCCTCCCAGAGCTGGCCCTGATGTTCCTTATACTTTTGGTCTCATAGGGGATCTTGGACAAACCTATGATTCAAATAGAACACTTACTCACTATGAGTTAAGCACAATTAAAGGACAGGCGCTATTGTATGTTGGGGACCTCTCTTATGCTGATGACTATCCGTTCCATGACAATATCAGATGGGATACATGGGGAAGATTTATAGAGAGGAGTTGTGCTTATCAACCTTGGATTTGGACTGTAGGAAATCACGAAATTGATTTTGCTCCTGATATTGGTGAAACCAAACCCTTTAAGCCTTATGAATATCGATACCAGGTGCCGTTTGAAGCATCAAAAAGTACATCCCCATTATGGTACTCAATCAAGAGAGCTTCAGCATATATCATTGTCATGTCATCTTACTCTGCATTTGGTAAATCCACTCCTCAATACAAATGGCTTTCATATGAGCTACCCAAAGTGAACAGGACTGAAACGCCATGGCTGATTGTCCTTATGCATTGTCCCATGTATAATAGCTACATACATCATTATATGGAAGGAGAAAGCATGAGGGTTATATATGAGCCATGGTTTGTGGAGTACAAAGTTGATGTTGTTTTTGCTGGTCACGTTCATGCCTATGAACGATCTGAACGAGTATCAAACATTGCCTACAACATTGTAAATGGGAAGTGCACTCCCATACATGATGAATCTGCCCCTGTTTACATAACCATTGGAGATGGAGGAAATCAAAAAGGATTGGCAACCGGCATGACAGAGCCACAGCCAAGTTACTCAGCCTATCGGGAAGCCAGTTTTGGTCATGGCATTCTGGATATTAGGAACCGGACTCACGCTTATTTCGGTTGGAATCGTAATCAAGACGCGTATGCTGTAGAAGCTGATTCTGTATGGCTTCACAACAGATACTGGACCTCTACACAAGAGCACTCCTCCATAGCTGCATCATGA 1407 0.4208 MGIRWYCAGFFLLVVVALDAGYFCDGGVTSSFARTNNISADMPLDSDVFRVPPGYNAPQQVHITQGDYEGNAVIISWITPDEPGSNTVLYWAENGKHKSHANGIVLTYKYFKYTSGYIHHCTIRNLVFDTKYYYEVGIGNTTRQFWFVTPPRAGPDVPYTFGLIGDLGQTYDSNRTLTHYELSTIKGQALLYVGDLSYADDYPFHDNIRWDTWGRFIERSCAYQPWIWTVGNHEIDFAPDIGETKPFKPYEYRYQVPFEASKSTSPLWYSIKRASAYIIVMSSYSAFGKSTPQYKWLSYELPKVNRTETPWLIVLMHCPMYNSYIHHYMEGESMRVIYEPWFVEYKVDVVFAGHVHAYERSERVSNIAYNIVNGKCTPIHDESAPVYITIGDGGNQKGLATGMTEPQPSYSAYREASFGHGILDIRNRTHAYFGWNRNQDAYAVEADSVWLHNRYWTSTQEHSSIAAS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1140 468 Pfam Iron/zinc purple acid phosphatase-like protein C 384 441 IPR025733 -
Vvi18g1140 468 Pfam Purple acid Phosphatase, N-terminal domain 58 149 IPR015914 GO:0003993|GO:0046872
Vvi18g1140 468 Gene3D - 57 153 - -
Vvi18g1140 468 SUPERFAMILY Purple acid phosphatase, N-terminal domain 38 151 IPR008963 GO:0003993|GO:0046872
Vvi18g1140 468 Gene3D - 154 463 IPR029052 -
Vvi18g1140 468 Pfam Calcineurin-like phosphoesterase 160 358 IPR004843 GO:0016787
Vvi18g1140 468 SUPERFAMILY Metallo-dependent phosphatases 153 460 IPR029052 -
Vvi18g1140 468 PANTHER ACID PHOSPHATASE RELATED 15 452 IPR039331 GO:0003993
Vvi18g1140 468 CDD MPP_PAPs 155 453 IPR041792 -
Vvi18g1140 468 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 154 462 - -
Vvi18g1140 468 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 57 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1140 Vvi-Chr18 11349203 11353628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1140 116 441 Miscellaneous Gene Families AT1G13900 25.926 2.05e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1140 K22390 - vvi:100241989 1002.66