Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1136 ATGTCGCTAGATTTACTTTCACCGTCTGCTTTGTTTTTAAAATGGTTTGCACTGACCTGCCATGGTCCAACATCACAAGCTGGCCAAAAAATTGAAGGTTTAATCAACAAAGAAGCAGTTTTGGACATGGTGGGCAGTACACACTTTAAGTGCAGACTTACCAGAGCAAAAGAATCTCCCTCCCCAGGACCTTCTTCATTGATAAGGGAACCTCAGAAATACTTCGATCAGGTAATCATTACTGTTTGTTCTGGAAATGGAGGCCATGGTGCAATTCTTAGCATGCTTAACCAGAGAGCTCCTTCAAGGCCACAAGGAAGACATGATAAGGGTAAAATGAGGAAGAAAAGTTTGCTTAAGAGGGATTTTGAAGATGAGGGAGAAGATTCATTACTGGAGTTTCACAAGAGTCGGTACAATGCAAAGCGTGGGGGAAATGTTGATGCCATGGGCGTTTTAACATCCGAGTTGCATGATGGACTTGCTGCACCGACATTGCGTAATCCTGTGCCTGTAGGCACAGTTGTGAAGCGTAAGCGAGGGAAGCTTCCGGCAGATCTAGCAGAACCAGGCAATGAAATTCTCATGGCAAGGGGTAGGCAAGGAGGTTCTTGTAGTTGA 621 0.4477 MSLDLLSPSALFLKWFALTCHGPTSQAGQKIEGLINKEAVLDMVGSTHFKCRLTRAKESPSPGPSSLIREPQKYFDQVIITVCSGNGGHGAILSMLNQRAPSRPQGRHDKGKMRKKSLLKRDFEDEGEDSLLEFHKSRYNAKRGGNVDAMGVLTSELHDGLAAPTLRNPVPVGTVVKRKRGKLPADLAEPGNEILMARGRQGGSCS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1136 206 Gene3D GTP1/OBG domain 73 206 IPR036726 -
Vvi18g1136 206 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 70 204 IPR045086 GO:0003924|GO:0005525
Vvi18g1136 206 MobiDBLite consensus disorder prediction 99 120 - -
Vvi18g1136 206 ProSiteProfiles Obg domain profile. 72 206 IPR006169 -
Vvi18g1136 206 Pfam GTP1/OBG 76 204 IPR006169 -
Vvi18g1136 206 SUPERFAMILY Obg GTP-binding protein N-terminal domain 74 204 IPR036726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1136 Vvi-Chr18 11331768 11334686 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1136 - - vvi:100259096 249.595