Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1135 ATGATGGACGTAGATCCGCGTCAATACGAAAATGCTGCTATCAATGACAGTGACATCCACAACATTGTCCTATCATATCTTGTGCATAATTGTTTTAAAGAGACTGTGGAATCATTTATTTCTTGTACTGGGATGAAGCAGCCTGCTGATTATCAGGAGGACATGGAGAAAAGAAAACGAATATTTCATTTTGCTTTGGAGGGCAATGCACTAAAGGCCATTGAACTGACAGAACAGCTGGCAGATGATTTACTAGAGAAAAATAAGGATTTGCATTTTGATCTTCTTAGCCTTCACTTTGTTAAGCTTGTATGCTCCAGGAAATGCACAGAAGCTCTGGAATTTGCTCAGACAAAGTTGACCCCTTTTGGAAAAGTGCAAAATTATGTTGAGAAGCTTGAAGACTTCATGACTCTGCTAGCTTATGAGGAGCCAGAAAAATCCCCAATGTTTCATCTGCTAAGCCTGGAATATCGGCAGCAAGTTGCAGATAGTTTGAACAGAGCACTTCTTGCACATGCCAACCTCCCTAGCTGTTCAGCAATGGAAAGGCTGATACAACAGACAACAGTAGTTAGACAATGCTTAAATCAAGAGCTTAGCAAGGATCCTCCTCCACCTTTTTCTTTGAAGGATTTTCTCAAGAGCTAA 651 0.4055 MMDVDPRQYENAAINDSDIHNIVLSYLVHNCFKETVESFISCTGMKQPADYQEDMEKRKRIFHFALEGNALKAIELTEQLADDLLEKNKDLHFDLLSLHFVKLVCSRKCTEALEFAQTKLTPFGKVQNYVEKLEDFMTLLAYEEPEKSPMFHLLSLEYRQQVADSLNRALLAHANLPSCSAMERLIQQTTVVRQCLNQELSKDPPPPFSLKDFLKS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1135 216 PANTHER RAN BINDING PROTEIN 9-RELATED 7 199 - -
Vvi18g1135 216 SMART toby_final6 107 202 IPR013144 -
Vvi18g1135 216 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 54 111 IPR006595 -
Vvi18g1135 216 SMART ctlh 54 111 IPR006595 -
Vvi18g1135 216 ProSiteProfiles LIS1 homology (LisH) motif profile. 15 47 IPR006594 GO:0005515
Vvi18g1135 216 Pfam CTLH/CRA C-terminal to LisH motif domain 55 192 IPR024964 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1135 K23338 - vvi:100260821 435.647