Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1133 ATGGCTCTTCCTCAGCTCATTCCTTCTCCTCCTTCTTCTTCTCTCTCTCGCAAACTCTTCTTAAACCCTAACTGTAGATTTTTTTCCCCATCATCTTCTGTCATTCCAGTCCCTTCTCTTGCACGTCACCGTCACCACCGTCGCCGGAAAGAGAATTCCCTCCGCTGCTCCGCATCCTCCTTCTCCGAGAAGCACCACACCGGCTCCCCCAAGTCCGATGACGTCGTCGAACTCCCTCTCTTTCCTCTTCCGTTGGTTCTATTTCCCGGGGCCATCCTCCCATTGCAGATCTTTGAGTTCCGATATCGGATGATGATGCACACTCTCTTACAGACGGATCTCCGATTCGGCGTCATCTACTCCGACGCCACTACCGGCACCGCCGATGTAGGGTGCGTCGGCGAGGTTGTGAAGCACGAGCGCCTCGTCGATGACCGGTTCTTCCTCATTTGCAAAGGGCAGGAGCGGTTCCGCGTCACGAACTTGGTTCGGACCAAACCCTATTTGGTGGCAGAGGTGACGTGGTTGGAGGATCGGCCCTCCGGCGACGGCGATGAGGACTTGGAGGCGTTGGCAAATGAGGTCGAAACCTATATGAAAGACGTAATTCGATTATCGAATCGATTGAATGGGAAGCCGGAAAAGGAGACCCAAGATTTGCGCCGGAACTTGTTCCCGACGCCGTTCTCGTTCTTTGTTGGTAGCACGTTCGAAGGCGCGCCGAGGGAGCAGCAGGCATTACTGGAATTGGAGGATACATCTGCGAGGTTGAAAAGGGAGAAGGAAACCTTGAGGAATACCCTGAATTACTTGACGGCAGCATCGGCGGTGAAAGACGTGTTTGCATCTTCGTGA 855 0.5392 MALPQLIPSPPSSSLSRKLFLNPNCRFFSPSSSVIPVPSLARHRHHRRRKENSLRCSASSFSEKHHTGSPKSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTLLQTDLRFGVIYSDATTGTADVGCVGEVVKHERLVDDRFFLICKGQERFRVTNLVRTKPYLVAEVTWLEDRPSGDGDEDLEALANEVETYMKDVIRLSNRLNGKPEKETQDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTSARLKREKETLRNTLNYLTAASAVKDVFASS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1133 284 Gene3D - 183 282 - -
Vvi18g1133 284 ProSiteProfiles Lon N-terminal domain profile. 78 266 IPR003111 -
Vvi18g1133 284 SMART lon_5 77 266 IPR003111 -
Vvi18g1133 284 Pfam ATP-dependent protease La (LON) substrate-binding domain 77 264 IPR003111 -
Vvi18g1133 284 Coils Coil 188 208 - -
Vvi18g1133 284 Gene3D - 59 176 IPR046336 -
Vvi18g1133 284 SUPERFAMILY PUA domain-like 77 265 IPR015947 -
Vvi18g1133 284 Coils Coil 240 267 - -
Vvi18g1133 284 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 31 283 - -
Vvi18g1133 284 MobiDBLite consensus disorder prediction 39 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1133 - - vvi:100255748 521.931