Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1118 ATGGCGAAACAGTCGACGTCGTGGTTGACATTTCACAAGAGATGGCCTCTCTTGCTCGTGGCATTGCTTTCAACGTCCACCGTGATAGTCTTGCTCATCAGAGCCGCATCCGATTCCTGCAACACTAATTCCGTCACTACTACTACTACTATTACTACTACTCCCCATTACAGCTATGAGAACACTCGAATTCAGGTAACCTCACAAGTTGAAACCCCATCGAATCCTCTCCGATTCATGAAATCCAAGCTCGTCCTCTTGGTTTCTCATGAGCTTTCTCTTTCTGGTGGACCTCTGTTACTGATGGAGCTTGCATTTTTGTTAAGAGGTGTGGGTGCGGAAGTTGTCTGGCTTACCATCCAAAAACCCACAGATTCAGATGAGGTCATATACAGTTTGGAGCATAGGATGTTGGACCGCGGAGTCAAGGTGTTCCCTGCAAAGGGTCAAGAAGCTATAGATACGGCTCTTAAAGCTGATTTGGTTGTTTTAAATACTGCTGTGGCTGGGAAGTGGTTGGATTCTGTGGTTAAAGAAAATGTCCCTCGCATTCTTCCAAAGGTGTTGTGGTGGATTCATGAAATGCGAGGGCATTATTTTAAATTGGAGTATGTTAAGCACCTTCCCTATGTTGCTGGTGCCATGATTGATTCACACACAACAGCAGAGTACTGGAAGAACAGAACACGAGAGCGGTTAGGAATTAAGATGCCTGAAACCTATGTTGTGCACCTTGGAAATAGCAAAGAACTGATGGAAATAGCTGAAAACAATGTGGCCAAAAGGGTTCTCCGTGAACATGTACGGGAATCTCTCGGAGTGCGGAATGAAGATTTACTATTTGCCGTAATAAATAGTGTTTCACGTGGGAAAGGTCAGGATCTATTTCTGCGTTCCTTCTATCAAAGTTTGCAGCTGATCAAAGGGAGGAAACTACAGGTGCCATCAATTCATGCAGTAATAGTGGGAAGTGACATGAATGCTCAAACAAAATTTGAAACCGAACTTCGCAACTTTGTTGTGGAAAACAAAATTCAAGACCAAGTGCATTTCATCAACAAAACCTTGACTGTAGCTCCTTATTTAGCTTCTATTGATGTTCTTGTGCAAAATTCTCAGGCCCGGGGAGAGTGTTTTGGGAGGATAACCATTGAAGCAATGGCCTTTCAGCTGCCTGTACTGGGCACGGCAGCTGGAGGAACCACAGAGATTGTGGTAAATGGGACAACAGGTTTGTTGCATAATGTTGGGAAAGAAGGCGTGAAACCTCTTGCAAATAATATTGTGAAGCTGGCAACAAATGTTGAGAGGAGGTTGACAATGGGAAAGAGAGGGTACGAAAGGGTTAAAGAGAGGTTCTTAGAACACCACATGTCTGAGAGAATTGCTTCAGTTCTAAAGGAAGTCTTGAAGAAGGCAGAAAACCACGCATTTTCTTGA 1440 0.4389 MAKQSTSWLTFHKRWPLLLVALLSTSTVIVLLIRAASDSCNTNSVTTTTTITTTPHYSYENTRIQVTSQVETPSNPLRFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGAEVVWLTIQKPTDSDEVIYSLEHRMLDRGVKVFPAKGQEAIDTALKADLVVLNTAVAGKWLDSVVKENVPRILPKVLWWIHEMRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEIAENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLFLRSFYQSLQLIKGRKLQVPSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVLVQNSQARGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGKEGVKPLANNIVKLATNVERRLTMGKRGYERVKERFLEHHMSERIASVLKEVLKKAENHAFS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1118 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 472 - -
Vvi18g1118 479 Gene3D Glycogen Phosphorylase B; 252 453 - -
Vvi18g1118 479 PANTHER GLYCOSYLTRANSFERASE 1 476 - -
Vvi18g1118 479 CDD GT4_PimA-like 112 467 - -
Vvi18g1118 479 FunFam UDP-Glycosyltransferase superfamily protein 255 453 - -
Vvi18g1118 479 Pfam Glycosyl-transferase family 4 81 260 IPR041693 -
Vvi18g1118 479 Pfam Glycosyl transferases group 1 268 448 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1118 Vvi-Chr18 11175258 11179147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1118 1 477 Glycosyltransferase AT1G19710 73.125 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1118 - - vvi:100257473 909.442