Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1106 ATGTCTGAACAGTTACGAAGAAATCCTTCTCAGCATGGAATTGCAAGAGATGCAATTAGCTTGTACATGCCAGAAGAGCCTCAGTGCTCTGCACGTAAGTGGTACTTCAGTATACAAGAAATAGAAAATCATTCTCCATCTCGGAAGGATGGCATTGACCCTAAGAAGGAAGCACAGTCACGGAAGTTGTATTGTTCATTTCTTTGGGAACTTGGCATGAAGCTTAAAGTGCCCCAGGTGGCAATAGCAACTGCACTGATGTTGTGCCATCGCTTTTATCTGCGTCAGTCTCTTGCAAAAAATGATTGGCAGATAATTGCAACTGTAAGCATGTTTCTTGCTTGTAAAGCAGAGGAAACACCCCGCTTGCTAAGGGATGTTATTATTATGGCATATGAGATGACTTATAGGTGTGATCCTCCTGCCCTGAAAAGAATCAAGCAGAGAGAATTTTTTGATAAGCAGAAGGAATTAATATTAATTGGGGAGAGACTTCTACTGGGGACCATTGCTTTTGATCTCAACATCGAACACCCCTACAAGCCAATTGTTGATGCTTTAAAGAGAATGGGGATTTCAAATAATGACCTTGTGAAAGCAGCACAGAATTTAATCAATGACTGGCTTTGCACAACATTGTGCTTGCAGTACAAACCTCATTATATTGCAGCTGGTTCACTGTTTCTTGCTGCCAAATTCCACAAAGTGAAACTTCCTACAGAAAAAGGAAAGGTTTGGTGGCTGCAGTTTGATGTTGCACCTAAACAATTAGAAGAGGTCATTCAACAGATGCGCAAGTTGTTGGAGAACAAAACACAGGCTCCATCTCCTACACACGCAAGGATGACTAAACCTACAGTTGTACTTGGAAACACATCACATTACCCACAACCATGCACTGCTCGGGAATCCAGCCATGGCACTACTGTTGGGAAACCTTTGGTGTCCAAGGGCAGTCTGAATGTGGCCTATAGTGACAGTCACTGCATTGTGAAAGAAGTGATTCAACATCCGACGAGTGGCACTAGTAGTGCAACTAGTGTTGTTGAGGATGGGGATGGTGAGATTCATTCAAGAACAAGAGAATCTGAAAGGAACTCGAGTTACAAGTTTGTTTCCATTTATGGTAAATACAGTAAGATAAATGCAAACCCAAATAAAGAGAATCCTTTGGAAAGGAGATGTTCTACTTCTTCAAAGAGGTCAGCAGTTGCCAGAGGTGATGAGATGTATAGTGAAGTGTGTATAGATGGTGATCTGCGGAAAGGAAGAGAGCAGGGATATGCCAATTCACATAAGAAACAGAGGAGGGTGTTGTTAGGCTTTTGA 1329 0.4206 MSEQLRRNPSQHGIARDAISLYMPEEPQCSARKWYFSIQEIENHSPSRKDGIDPKKEAQSRKLYCSFLWELGMKLKVPQVAIATALMLCHRFYLRQSLAKNDWQIIATVSMFLACKAEETPRLLRDVIIMAYEMTYRCDPPALKRIKQREFFDKQKELILIGERLLLGTIAFDLNIEHPYKPIVDALKRMGISNNDLVKAAQNLINDWLCTTLCLQYKPHYIAAGSLFLAAKFHKVKLPTEKGKVWWLQFDVAPKQLEEVIQQMRKLLENKTQAPSPTHARMTKPTVVLGNTSHYPQPCTARESSHGTTVGKPLVSKGSLNVAYSDSHCIVKEVIQHPTSGTSSATSVVEDGDGEIHSRTRESERNSSYKFVSIYGKYSKINANPNKENPLERRCSTSSKRSAVARGDEMYSEVCIDGDLRKGREQGYANSHKKQRRVLLGF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1106 442 PIRSF Cyclin_L 32 438 - -
Vvi18g1106 442 Gene3D - 176 282 - -
Vvi18g1106 442 PANTHER CYCLIN 32 340 IPR043198 GO:0006357|GO:0016538
Vvi18g1106 442 Gene3D - 25 174 - -
Vvi18g1106 442 FunFam Cyclin family protein 25 174 - -
Vvi18g1106 442 SUPERFAMILY Cyclin-like 177 273 IPR036915 -
Vvi18g1106 442 SUPERFAMILY Cyclin-like 30 176 IPR036915 -
Vvi18g1106 442 FunFam Putative cyclin-T1 family protein 176 276 - -
Vvi18g1106 442 Pfam Cyclin, N-terminal domain 39 175 IPR006671 -
Vvi18g1106 442 SMART cyclin_7 181 269 IPR013763 -
Vvi18g1106 442 SMART cyclin_7 66 168 IPR013763 -
Vvi18g1106 442 MobiDBLite consensus disorder prediction 341 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1106 Vvi-Chr18 11070925 11087643 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1106 K15188 - vvi:100266147 889.026