Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1098 ATGGAAGTGATGCAAGTACTCCATATGAACAAAGGGGCTGGGGAGACAAGTTACGCAACCAACTCCACAGTTCAGAGCAACATTATATCCACAGCGAAACCAGTGACGGAGGAAGCTATACTAGATATATTCAACAATGTCTTGCCTGAGAGCGTAGGCATTGCGGATTTGGGTTGCTCATCTGGACCCAACACCTTGTTGGTGGTGTCAGAGATACTGGACGTGATATATGCCAAATGGCAGCAGCTGGGTCGTCCTTGTTCGCCTGAGTTTAGGGTGTACTTGAATGATCTTATCGGCAATGACTTCAACAATGTGTTTGGCTCACTCCCTGCATTTTACAACAAACTCAAGGAAGAGAAAGGCTCCGAGTTTGGGCCATGTTTTATATCGGGTGTGCCTGGTTCATTTTACGGGAGGGTGTTCCCAAGCAAGAGTCTCCACTTCGTGCACTCTTCTTCCAGTCTCCACTGGCTCTCTCAGGTTCCACCGGGTCTAGAGAGCAAGGATGGGAGAGGGAGCTGGAACAAGGGAAAAATTTACATATCAAAGACGAGTCCAGATTGCGTTTTGGAGGCATACTCATCGCAGTTCCAGAAGGACTGGTCAGTGTTTCTCAAGTCACGTGCAGAAGAAATAGTGGGGGGAGGACGCATGGTGTTGTCCTTCATGGGCAGGAGATCCACAGACCCTCGTTCAAAAGAGAGTTGCTACCAGTGGGAGCTCTTAGCCCGAGCACTCATGAGCATGGTTTCGGAGGGTCTAATCGAAGAGAAAAAGGTTGATTCATTCGATGCTCCATACTATGCACCAAGTCCGGAAGAAGTGAAATTTGGAATATACAAAGAGGGGTCATTCATCTTAGATCGGCTGGAAATGTTTGAAATAGATTGGGATGGAGGTGATGGTGATAATTATGATGCAACTCCCACGTCCTCAACGCTATCAAATGGAGCACGAGTGGCTAAGACAATTAGAGTTGTGGTTGAGTCCATGCTAGCAAGCCATTTTGGAGGAGATGTAATGGATGGTTTATTTCAAAGGTACGGTGAGATGGTGGGCGATCACTTGGCAAAGACAAGGACTAAGTATATTAATTTGGTCATCTCCCTTGTAAGAAAAGTTTAA 1128 0.4654 MEVMQVLHMNKGAGETSYATNSTVQSNIISTAKPVTEEAILDIFNNVLPESVGIADLGCSSGPNTLLVVSEILDVIYAKWQQLGRPCSPEFRVYLNDLIGNDFNNVFGSLPAFYNKLKEEKGSEFGPCFISGVPGSFYGRVFPSKSLHFVHSSSSLHWLSQVPPGLESKDGRGSWNKGKIYISKTSPDCVLEAYSSQFQKDWSVFLKSRAEEIVGGGRMVLSFMGRRSTDPRSKESCYQWELLARALMSMVSEGLIEEKKVDSFDAPYYAPSPEEVKFGIYKEGSFILDRLEMFEIDWDGGDGDNYDATPTSSTLSNGARVAKTIRVVVESMLASHFGGDVMDGLFQRYGEMVGDHLAKTRTKYINLVISLVRKV* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1098 375 Pfam SAM dependent carboxyl methyltransferase 44 373 IPR005299 GO:0008168
Vvi18g1098 375 Gene3D - 6 360 IPR042086 -
Vvi18g1098 375 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 7 361 IPR005299 GO:0008168
Vvi18g1098 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 374 IPR029063 -
Vvi18g1098 375 Gene3D Vaccinia Virus protein VP39 21 361 IPR029063 -
Vvi18g1098 375 FunFam Jasmonate O-methyltransferase, putative 31 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1098 Vvi-Chr18 10999096 11003052 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1098 K08241 - vvi:100266134 737.643