Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1097 ATGCAAACGCTTCACATGAACGCCGGATCTGGGGAGACCAGTTATGCAAAGAACTCGTCGGTTCAGAGCAACATTATATCCACAGCGAAACCAGTGACGGAGGAAGCTATACTAGATATATTCAACAATGTCTTGCCTGAGAGCGTAGGCATTGCGGATTTGGGTTGCTCATCTGGACCCAACGCCTTGTTGGTGGTGTCAGAGATACTGGACGTGATATATGCCAAATGGCAGCAGCTGGGTCGTCCTTGTTCGCCTGAGTTTAGGGTGTACTTGAATGATCTCATCGGCAATGACTTCAACAATGTGTTTGGCTCACTCCCTGCATTTTACAACAGACTCAAGGAAGAGAAAGGCTCCGAGTTTGGGCCATGTTTTATATCGGGTGTGCCTGGTTCATTTTACGGGAGGGTGTTCCCAAGCAAGAGTCTCCATTTCGTGCACTCTTCTTCCAGTCTCCACTGGCTCTCTCAGGGTCTAATCGAAGAGAAAAAGGTTGATTCATTCGATGCTCCATACTATGCACCAAGTCCGGAAGAAGTGAAATTTGGAATATACAAAGAGGGGTCATTCATCTTAGATCGGCTGGAAATGTTTGAAATAGATTGGGATGGGGGTGATGGTGATAATTATGATGCAACTCCCACGTCCTCAACGCTATCAAATGGAGCACGAGTGGCTAAGACAATTAGAGCTGTGGTTGAGTCCATGCTAGCAAGCCATTTTGGAGGAGATGTAATGGATGGTTTATTTCAAAGGTACGGTGAGATGGTGGGCGATCACTTGGCAAAGACAAGGGCTAAGTATATTAATTTGGTCATCTCCCTTGTAAGAAAAGTTTAA 843 0.4579 MQTLHMNAGSGETSYAKNSSVQSNIISTAKPVTEEAILDIFNNVLPESVGIADLGCSSGPNALLVVSEILDVIYAKWQQLGRPCSPEFRVYLNDLIGNDFNNVFGSLPAFYNRLKEEKGSEFGPCFISGVPGSFYGRVFPSKSLHFVHSSSSLHWLSQGLIEEKKVDSFDAPYYAPSPEEVKFGIYKEGSFILDRLEMFEIDWDGGDGDNYDATPTSSTLSNGARVAKTIRAVVESMLASHFGGDVMDGLFQRYGEMVGDHLAKTRAKYINLVISLVRKV* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1097 280 Gene3D Vaccinia Virus protein VP39 18 157 IPR029063 -
Vvi18g1097 280 Gene3D Vaccinia Virus protein VP39 172 202 IPR029063 -
Vvi18g1097 280 Pfam SAM dependent carboxyl methyltransferase 41 158 IPR005299 GO:0008168
Vvi18g1097 280 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 158 264 IPR005299 GO:0008168
Vvi18g1097 280 FunFam Jasmonate O-methyltransferase, putative 28 160 - -
Vvi18g1097 280 FunFam Salicylate/benzoate carboxyl methyltransferase 189 265 - -
Vvi18g1097 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 279 IPR029063 -
Vvi18g1097 280 Gene3D - 4 158 IPR042086 -
Vvi18g1097 280 Gene3D - 159 265 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1097 Vvi-Chr18 10990319 10995000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1097 K08241 - vvi:100260930 294.278