Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1096 ATGTTGAGCAACCACTTGTCTGCAGACAGCATAGGCATTGGGGATTTGGGATGCTCATCTGGACCCAACACCTTATTGGTGATATCAGAGATATTGAACGTCATATATGCCAAATGGTGCCTGCAGGGCTGTGGTTCATCACCGGAGTTTAGGGTGTACTTGAACGATCTTACCACCAATGACTTCAATAATGTATTTGGCTCACTCCCAGCTTTTTACACCAAATTGAAGGAAGAAAAGGGTTCAGGATTCGGGCCATGTTTTATAGTTGGGATGCCTGGTTCATTTTATGGGAGGCTGTTCCCAACCAAGAGTATGCACTTTGTGCACTCCTCTTCCAGCCTTCATTGGCTCTCTCAGGTTCCACTTGGTTTGGACAGCAAGGCCACCACACACAACAGGGGAAAGATTTATATATCAAAGACAAGCCCGCTTTGCGTTCTGGAAGCATACTTGATTCAATTCCAGAAGGACTTCTCACTATTTCTCAAGTCACGATCGGAAGAGATAGTTCCCAAAGGACGCATGGTATTGTCATTCATGGGTAGGAGATCTCCAGATCCCGCTGCAGATGAGAGTTGCTACCAATTTGAACTCTTAGCACGAGCACTAATGAGCATGGTCTCAGAGGGCCTTGTTGAAGAAGAGAAGGCCGATTCTTTCAATTTGCCCTTCTACACACCGTCTCCTGAAGAAGTGGACTTTGAGATACAAAAAGAAGGATCATTCATCCTCGACCGCCTCGAGACTTTTGAAATTGATTGGATTAATGGAAATGATGGGAATAGTTCTGTGAGTGAAGGTGTGTATCCCACATCGGAAGCACTATCGAGGGGCCATGGACACTCAAAGATTATTAGAGCTGTGGTGGAGTCCATGCTGGAATTCCACTTTGGAGGACATATAATGGATGATCTATTTAAAAGGTATGGCGACATTGTGGATGATCACTTGTCAAAGACTACACCCAAGTACATCGTTTTGGTTATTTCCCTTGTCAAAAAAGGTTAA 1011 0.4451 MLSNHLSADSIGIGDLGCSSGPNTLLVISEILNVIYAKWCLQGCGSSPEFRVYLNDLTTNDFNNVFGSLPAFYTKLKEEKGSGFGPCFIVGMPGSFYGRLFPTKSMHFVHSSSSLHWLSQVPLGLDSKATTHNRGKIYISKTSPLCVLEAYLIQFQKDFSLFLKSRSEEIVPKGRMVLSFMGRRSPDPAADESCYQFELLARALMSMVSEGLVEEEKADSFNLPFYTPSPEEVDFEIQKEGSFILDRLETFEIDWINGNDGNSSVSEGVYPTSEALSRGHGHSKIIRAVVESMLEFHFGGHIMDDLFKRYGDIVDDHLSKTTPKYIVLVISLVKKG* 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1096 336 Gene3D Vaccinia Virus protein VP39 4 254 IPR029063 -
Vvi18g1096 336 Pfam SAM dependent carboxyl methyltransferase 3 334 IPR005299 GO:0008168
Vvi18g1096 336 Gene3D - 120 321 IPR042086 -
Vvi18g1096 336 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 9 320 IPR005299 GO:0008168
Vvi18g1096 336 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 335 IPR029063 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g1096 Vvi-Chr18 10974417 10982449 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1096 K08241 - vvi:100255862 681.789