Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1093 ATGGCGCTAACACTAAGCAACACCTTTCTCCAGAGAAAGCTCTCTCCTCCAACTCTTCCTATCAAAAAGGCAAATGCTGTGAGGGCATATCGTCCTCAGTGGACGTGCAGGAAAAAGGACATACACCCACAGTTCTATGAGGACGCCAAGGTGTACTGCAATGGTGAACTGGTGATGACCACTGGTGGGACTCAGAAGGAGTATGTGGTCGATGTCTGGTCTGGAAACCACCCCTTCTACCTCGGGAACCGCTCCGGTCTTCTAGTGGACGCTGATCAAGTCGAGAAGTTCCGGAAGAAGTTTGGGGAAATATCACAGATTATGGAAATTCCTGTACTCAAATATGGAGAAATTGTGCTACCACCTAAACGCAAATCTGGTTCTGGTAAAGGGGGAAAGAAGAAGTAG 408 0.4804 MALTLSNTFLQRKLSPPTLPIKKANAVRAYRPQWTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFYLGNRSGLLVDADQVEKFRKKFGEISQIMEIPVLKYGEIVLPPKRKSGSGKGGKKK* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1093 135 Gene3D Ribosomal protein L31 38 105 IPR042105 -
Vvi18g1093 135 PANTHER 50S RIBOSOMAL PROTEIN L31, CHLOROPLASTIC 1 134 IPR002150 GO:0003735|GO:0005840|GO:0006412
Vvi18g1093 135 PRINTS Ribosomal protein L31 signature 38 55 IPR002150 GO:0003735|GO:0005840|GO:0006412
Vvi18g1093 135 PRINTS Ribosomal protein L31 signature 67 82 IPR002150 GO:0003735|GO:0005840|GO:0006412
Vvi18g1093 135 SUPERFAMILY L28p-like 38 103 IPR034704 -
Vvi18g1093 135 Pfam Ribosomal protein L31 38 102 IPR002150 GO:0003735|GO:0005840|GO:0006412
Vvi18g1093 135 NCBIfam 50S ribosomal protein L31 38 103 IPR002150 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1093 Vvi-Chr18 10951047 10951578 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1093 K02909 - vvi:100250681 259.225