Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1091 ATGAAGAGTTGGGCTTTAGCTTTGCTTGTTCTTGTGTTTATTCAAAAACAGGGGAATTTCCTCCAAGTGGAAGCAGCCGATGGGTTCGTTAAAACCAGTGGAATGCATTTCGTGTTGAATGGGCTTCCGTACCATGCAAATGGGTTCAATGCGTATTGGTTAATGTATGTGGCCTCAGACCCATCTCAGAGAAGCAAAATCTCATCTGCCTTTGCAGAAGCTGCAGGTCATGGCCTTACGATAGCCAGAACATGGGCTTTCAGTGATGGTGGATACAGACCTCTACAGTACTCTCCTGGCTCCTACAACGAACAGATGTTCCAGGGGTTGGATTTTGTAGTATCAGAAGCAGGAAAATATGGGATAAAGCTAGTGTTGAGCTTGGCAAACAATTATGAAAGCTTTGGAGGAAAGAAGCAGTATGTGGACTGGGCAAGAGGTCAGGGGCAGTATTTAACATCTGATGATGATTTCTTTAGGAACTCAGTGGCGAAGGGATATTACAAAAACCATATCAAGACTGTTCTTACAAGGCGTAACAGCATCACTGGAGTTGTTTATAAGGATGAGCCAACGATAATGGCTTGGGAGCTTATGAATGAGCCTAGATGCACTTCAGATCCATCAGGGAGGACGATTCAGGCTTGGATTACAGAGATGGCCTCTTATGTAAAATCCGTTGATGGAAATCACTTACTAGAAGCAGGTTTGGAGGGGTTTTATGGACAAACATCACCTCAGAAGCAGCAATACAATCCAAATTTTCAAGTGGGAACAGATTTTATTGCAAATAATCAGATCCCTGGCATTGATTTTGCTACAGTTCACTCATATCCTGATCAATGGTTCTCTAGCTCAAGCGATGACACCCAACTTTCATTCTTGAATGAATGGCTCAAGAATCATATCCAAGATGCACAGAATGTTCTTCGAAAACCGCTTCTCTTTACTGAGTTTGGGAAATCGTCAAAAGATTCCGGTTACAGCACATACCAGAGGGACATGCTGTTCAACACAGTCTACTCTGCAATCTATTCATCAGCCAGGAGTGGAGGTGCAGCTGTTGGTGGCATGTTCTGGCAACTTCTAACCGAAGGAATGGACTCTTTCAGAGATGGCTATGAGATAGTCCTCAGTGAGAGCCCCTCAACAGCCAATGTGATTGCTCAACAGTCCCACAAGCTTTACCTGCTTCGGAAGATGTATGCTAGGTTGAGAAACATACAGAAGTGGAAGAGAGCCAGAGCCATCAGAAGGGCTCAATGGTGGAATAGGAACAAGGGCAAGAATACGGGAAATTAA 1302 0.4401 MKSWALALLVLVFIQKQGNFLQVEAADGFVKTSGMHFVLNGLPYHANGFNAYWLMYVASDPSQRSKISSAFAEAAGHGLTIARTWAFSDGGYRPLQYSPGSYNEQMFQGLDFVVSEAGKYGIKLVLSLANNYESFGGKKQYVDWARGQGQYLTSDDDFFRNSVAKGYYKNHIKTVLTRRNSITGVVYKDEPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYVKSVDGNHLLEAGLEGFYGQTSPQKQQYNPNFQVGTDFIANNQIPGIDFATVHSYPDQWFSSSSDDTQLSFLNEWLKNHIQDAQNVLRKPLLFTEFGKSSKDSGYSTYQRDMLFNTVYSAIYSSARSGGAAVGGMFWQLLTEGMDSFRDGYEIVLSESPSTANVIAQQSHKLYLLRKMYARLRNIQKWKRARAIRRAQWWNRNKGKNTGN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1091 433 Pfam Cellulase (glycosyl hydrolase family 5) 66 335 IPR001547 GO:0004553|GO:0071704
Vvi18g1091 433 FunFam Mannan endo-1,4-beta-mannosidase 6 26 399 - -
Vvi18g1091 433 SUPERFAMILY (Trans)glycosidases 29 388 IPR017853 -
Vvi18g1091 433 Gene3D Glycosidases 25 399 - -
Vvi18g1091 433 PANTHER - 5 424 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1091 Vvi-Chr18 10937061 10940009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1091 1 415 Glycoside Hydrolase AT5G66460 68.106 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1091 K19355 - vvi:100245556 885.945