Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1090 ATGGAAGGAGGTCGGACTGATCAGAACGAGGGAGGTGGAAAGGGCAGCGTTTGCGTGACGGGGGCCACAGGATTCATAGGATCATGGCTGGTTATGAGGCTTCTCCAACGAGGTTACTATGTTCATGGAACTGTGCGCGATCCCGCGGACCATGGTAAGGTGAAGCATCTTCTGGAATTGCCGAAAGCCGGCACGCATCTGAGCTTGTGGAGAGCAGATTTGAAGGAAGAGGGAAGTTTTGACGATGCTATTCAGGGATGTGTTGGAGTCTTCCATGTCGCTTCCCCTATGGACATATCGGTTAAGGACGCCGAGAATGAAATGATAAAACCAACAGTAAATGGAATGTTGGACATCATGAGGGCCTGCACTAAGGCCAAGAGCGTTAAGCGGCTTATCTACACTTCAACCACCGGAACCATTTCCACTGGGCCACAACCGCCTCCGCTTGAGTTTGATGAGAGCTTCTGGACTGATATAGACTACTGCAAGGCTCAAAAGATGACTGCATGGATGTATTACGTTGCTAAAACAACAGCGGAGAAAGTTGCATGGGAATTCGCCAAAGAGAAAGGCCTTGATCTTGTCACCATTCATCCGCCTTTCGTGATTGGTCCTTTTATTTCACCTTCCTTGTCAGTTGGTGCTAAAATTTCACTTGCCTTGCTTACTGGAGATGAACGCAGCTATGTGCTCTTGACTCGAGGACAAGCTGTGCATGTAGAGGACCTGTGCAATGCTCATATATACCTGTTTGAGCATCCAGAGGCAAGGGGACGATACATTTGCTCCTCTCATTGTTTTGAGATCACAGAGCTTGCTAGGTCATTGAGCAACAAGTATCCAGAGTACAATATCCCAGCCAAATTTGAGGGTATGGATCAATTCCCGAAACCCGTTCCGCTCTCTTCTAAGAAACTATTGGACCTTGGATACAAATTTCAGTACAATTCGGAGGAATACGACATTGGGGATGTGTGTGCTGAAGCCATTGAATCATGCAGAGAGAAGGGGCTTCTGCCACTTCCGGCTGACAAGTAA 1041 0.4784 MEGGRTDQNEGGGKGSVCVTGATGFIGSWLVMRLLQRGYYVHGTVRDPADHGKVKHLLELPKAGTHLSLWRADLKEEGSFDDAIQGCVGVFHVASPMDISVKDAENEMIKPTVNGMLDIMRACTKAKSVKRLIYTSTTGTISTGPQPPPLEFDESFWTDIDYCKAQKMTAWMYYVAKTTAEKVAWEFAKEKGLDLVTIHPPFVIGPFISPSLSVGAKISLALLTGDERSYVLLTRGQAVHVEDLCNAHIYLFEHPEARGRYICSSHCFEITELARSLSNKYPEYNIPAKFEGMDQFPKPVPLSSKKLLDLGYKFQYNSEEYDIGDVCAEAIESCREKGLLPLPADK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1090 346 CDD FR_SDR_e 17 311 - -
Vvi18g1090 346 Pfam NAD dependent epimerase/dehydratase family 17 257 IPR001509 -
Vvi18g1090 346 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 16 315 - -
Vvi18g1090 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 321 IPR036291 -
Vvi18g1090 346 FunFam Dihydroflavonol reductase 14 342 - -
Vvi18g1090 346 Gene3D - 12 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1090 Vvi-Chr18 10931346 10933193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1090 9 339 Miscellaneous Gene Families AT5G19440 41.742 6.56e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1090 K13082 - vvi:100259090 707.597