Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1089 ATGGAAGGAGGTGAGAAGGGCACCGTTTGCGTCACGGGCGCCTCGGGATTCATAGGATCATGGCTGGTTATGAAGCTTCTCCAACGAGGCTACTATGTTCATGCAACCGTACGCGATCCTGGCAACGTGGAGAAGGTGAAGCATCTTTTAGAGTTGCCCAAAGCCAGCACACACCTGAGCTTGTGGAGAGCAGACCTGAAGGAAGAGGGAAGTTTTGACGATGCTATTCAGGGATGTATTGGAGTCTTCCACGTGGCTTCCCCTATGGACATATCGACTCAGGATGCCCAGAATGAAGTGATAGATCCAACAGTGAATGGGGTTTTAGACATCATGAGAGCCTGCACCAAGGCCAAGACCGTCAAGCGGTTCATCTATACTTCAACCACTGGAACCATTACAGTTGGACCAGAACCACTCCCGCTTGAGTACGATGAAAGCTTTTGGACTGACGTCGACTACTGCAAGGCTCAGAAGATGACTGCGTGGATGTATTTTATTGCTAAAACAACAGCCGAGAAAGCTGCGTGGGAATTCGCCAAAGAGAAAGGCCTGGATGTTGTTACCATTCAACCCCCTGTTGTGGTGGGGCCATTTGTTACACCTTCCCTGCCTCCTAGCGCTAAACTTGTACTCGCGGTACTCACTGGAGAGGAAGCTGGCTGCAACTTGTTGGCTCGAGGACGAGCTGTGCATGTAGATGACCTATGTGATGCCCACATATACCTATTTGAACATCCAGAGGCAAAGGGACGGTACATTTGCTCTTCCCATTGTTTTAATATCATTGAGCTAGCAAGATCATTGAGCCTCAAGTACTCAGAGTACAATATCCCAACCAAATTTGAGGGTGTGGATGAATCCTTGAAATCTATCCCTTGTTCCTCTAGGAAACTATTGGACCTTGGCTACAAATTTAAGTACAACTCAGAGGAATACGACATTGGGGATCTGTGTTCTGGAGCCATTGAATCATGCAAAGAGAAGGGGCTGATGCCATCTCCTGGTGCTTTCCTCTTATTTCCATGGAAATTTCATGATTATATACTATGCTTGATAGGTTTTTTTAGGTTTAGATCTCAATTGTTGTTCATTTGCTATGATTTCGAAGTATCAGGTATCAGACTCGGCGCGAAGAGACTTGAGGCGGATACGACTCGGCCAAATCGTATTGGACTCGGCCAATACTTTGAACCATGGCCACATGAGAAACAAAGAAGCCAGCAGTTTTGA 1233 0.4688 MEGGEKGTVCVTGASGFIGSWLVMKLLQRGYYVHATVRDPGNVEKVKHLLELPKASTHLSLWRADLKEEGSFDDAIQGCIGVFHVASPMDISTQDAQNEVIDPTVNGVLDIMRACTKAKTVKRFIYTSTTGTITVGPEPLPLEYDESFWTDVDYCKAQKMTAWMYFIAKTTAEKAAWEFAKEKGLDVVTIQPPVVVGPFVTPSLPPSAKLVLAVLTGEEAGCNLLARGRAVHVDDLCDAHIYLFEHPEAKGRYICSSHCFNIIELARSLSLKYSEYNIPTKFEGVDESLKSIPCSSRKLLDLGYKFKYNSEEYDIGDLCSGAIESCKEKGLMPSPGAFLLFPWKFHDYILCLIGFFRFRSQLLFICYDFEVSGIRLGAKRLEADTTRPNRIGLGQYFEPWPHEKQRSQQF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1089 410 Pfam NAD dependent epimerase/dehydratase family 9 251 IPR001509 -
Vvi18g1089 410 CDD FR_SDR_e 9 303 - -
Vvi18g1089 410 FunFam Dihydroflavonol reductase 6 334 - -
Vvi18g1089 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 313 IPR036291 -
Vvi18g1089 410 Gene3D - 3 337 - -
Vvi18g1089 410 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1089 Vvi-Chr18 10917869 10923188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1089 2 312 Miscellaneous Gene Families AT4G27250 39.571 2.93e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1089 K13082 - vvi:100267635 682.945