Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1086 ATGGCCGCCATTACTTCTCACTGTGCTCTGCGATCAGACTGTGCTCCCTTCTCCTCCTCCTCTTCGTCTTTCTCCGGCCAGGCTTTTCGCCAACCTGCTCCTTTTCCCGGCATTTCCTTGTCTTCCTCGGCAATTTCTCCGACACTCCGCCGCCGCATCTCTTGTCAGACATCCTCTGCGATTTCACCTTCATCTGCCGTCAATGTAAAAGAAAAATCAGGGCTCAAGGATTTTCTTCACATTAATGATTTTGACAAAACTACTATTTTGAAGATCCTAGATCGTGCCTTGGAGGTCAAGGCACTGCTAAAGTCAGGAGAAAGGACATTTCTCCCATTTAAAGGGAAGACAATGGCAATGATATTTGCAAAGCCGTCCATGAGAACACGGGTTTCATTTGAGACTGGATTTTTCTTGCTTGGAGGTCATGCTTTATATCTAGGACCAGATGATATCCAGATGGGTAAACGGGAGGAAACTCGTGATGTTGCTCGTGTGCTGTCTTGTTATAATGACATCATTATGGCACGTGTTTTTGCTCATCAGGACATTCTTGATCTGGCTAAATATGCAACTGTACCTGTCATCAATGGCCTGACAGACTACAATCATCCCTGCCAAATAATGGCTGATGCCCTCACAATAATTGAACACATTGGTCAGTTGGAAGGAACTAAGGTTGTCTATGTTGGGGATGGGAACAACATTGTGCATTCCTGGCTGCTGCTGGCTGCAGTTGTTCCCTTCCATTTTGTCTGTGCCTGTCCTAAAGGTTTTGAACCAGATGAGAAAACGGTTCAGAAGGCACAACAGGCTGGAATTAGCAAGATTGAGATAACAAATGATCCAAAAGAAGCTGTTAGAGGAGCAGATGTTGTATACTCAGATGTTTGGGCTAGCATGGGGCAAAAGGAAGAGGCCTCATATCGCCGGCAAGTGTTTCAAGGATTTCAGGTGGATGAACCCCTTATGAAGTTAGCCGGGCCAAAAGCCTATTTCATGCATTGTTTACCGGCTGAAAGAGGCGTGGAGGTGACTGATGGGGTTCTTGAAGCGCCAAATTCCATTGTCTTCCCACAAGCAGAGAACCGCATGCATGCACAGAATGCCATAATGCTTCATGTGCTTGGCTTGTGA 1137 0.4609 MAAITSHCALRSDCAPFSSSSSSFSGQAFRQPAPFPGISLSSSAISPTLRRRISCQTSSAISPSSAVNVKEKSGLKDFLHINDFDKTTILKILDRALEVKALLKSGERTFLPFKGKTMAMIFAKPSMRTRVSFETGFFLLGGHALYLGPDDIQMGKREETRDVARVLSCYNDIIMARVFAHQDILDLAKYATVPVINGLTDYNHPCQIMADALTIIEHIGQLEGTKVVYVGDGNNIVHSWLLLAAVVPFHFVCACPKGFEPDEKTVQKAQQAGISKIEITNDPKEAVRGADVVYSDVWASMGQKEEASYRRQVFQGFQVDEPLMKLAGPKAYFMHCLPAERGVEVTDGVLEAPNSIVFPQAENRMHAQNAIMLHVLGL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1086 378 Gene3D Aspartate/ornithine carbamoyltransferase 78 372 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 FunFam Ornithine carbamoyltransferase 212 363 - -
Vvi18g1086 378 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 76 217 IPR006132 GO:0006520|GO:0016743
Vvi18g1086 378 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 223 374 IPR006131 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 204 215 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 122 141 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 329 338 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 341 364 IPR006130 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 PRINTS Ornithine carbamoyltransferase signature 293 303 IPR002292 GO:0016743
Vvi18g1086 378 PRINTS Ornithine carbamoyltransferase signature 355 366 IPR002292 GO:0016743
Vvi18g1086 378 PRINTS Ornithine carbamoyltransferase signature 153 166 IPR002292 GO:0016743
Vvi18g1086 378 PRINTS Ornithine carbamoyltransferase signature 120 134 IPR002292 GO:0016743
Vvi18g1086 378 PRINTS Ornithine carbamoyltransferase signature 193 207 IPR002292 GO:0016743
Vvi18g1086 378 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 71 377 - -
Vvi18g1086 378 Gene3D Aspartate/ornithine carbamoyltransferase 207 363 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 75 377 IPR036901 GO:0006520|GO:0016597|GO:0016743
Vvi18g1086 378 NCBIfam ornithine carbamoyltransferase 76 376 IPR002292 GO:0016743
Vvi18g1086 378 FunFam ornithine carbamoyltransferase, chloroplastic 76 211 - -
Vvi18g1086 378 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 75 377 IPR024904 GO:0004585|GO:0006591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1086 K00611 - vvi:100243725 749.969