Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1083 ATGTGCTCAGAGGAAAGAGGAGGGAGGCAAGCCAAGAAAAGAAGGGGAGAGGCAAGAATGGGGGCGGAACCCCTATTGCCCAAGAAGACCCACACCCACACCCAACCAAACTCTCCTCTCATCCTTGGACTCCAACCATCTGCCCTCATCGACCACGTCGCTAAAATTGATTCGTCTTTGCTGGCTCAAATCCCCGGCGAGCGTGGTGGCTCGATTGCGGTTGCAATTGAAGACCTGGAGCATATCTTAAATGAGGTGAAGACCCACATCCTTTCTTCTCCTCCTGATCCATCTCCTATGAGGACAATGGCCGGGGGCAGTGTTGCCAATACTATTCGAGGCCTCTCTGCAGGCTTTGGGGTCAACTGTGGAATACTTGGAGCATGTGGGGATGATGAGCAAGGCGGCTTGTTTGTAAGTAACATGGGCTCTAGTGGAGTGAACCTTTCAGCATTGAGGATAAAGAAGGGGCCAACAGCTCAGTGTGTTTGCCTGGTTGATGCATTGGGCAATCGTACAATGCGGCCCTGTCTCTCAAGTGCTGTTAAGATTCAGGCAGAGGAATTAACTAAAGAGGATTTTAAAGGGGTAAAGTGGTTGGTAATGAGATATGGGATATATAATTTGGAAGTTATTCATGCTGCAATTCGGATGGCCAAACAGGAGGGCGTATTTGTATCCTTGGATTTGGCCAGTTTTGAGATGGTTCGGAACTTTAGAGGACCTCTTCTAGAGTTACTGCAATCAGGGGATATAGATCTTTGCTTTGCCAATGAGGATGAAGCAAGAGAGCTGTTAAGAGATGACGAAAATGCTAGTCCTGAGGCTGCTCTTGAATTTCTTGCTAAGCACTGCCAATGGGCAGTGGTGACGCTAGGTTCTAATGGTTGCCTTGCAAAATGCGGAAGAGAGATGGTCCGAGTTGCAGCCATAGGGGAGGCAAAGGCAACTGATGCCACTGGAGCAGGGGACCTGTTTGCAGGTGGATTTTTGTATGGGTTAGTGAAGGGACTATCACTGGAAGAATGCTGCCGAGTGGGCACATGTAGTGGTGGGTCTGTCATTCGTTCTCTTGGGGGCGAGGTGACTCCTGAGAACTGGCAATGGATGTACAAGCAGATGCAGATAAAGGGTCTCCCTGTTCCTGGCCTACGTCAATGA 1161 0.4944 MCSEERGGRQAKKRRGEARMGAEPLLPKKTHTHTQPNSPLILGLQPSALIDHVAKIDSSLLAQIPGERGGSIAVAIEDLEHILNEVKTHILSSPPDPSPMRTMAGGSVANTIRGLSAGFGVNCGILGACGDDEQGGLFVSNMGSSGVNLSALRIKKGPTAQCVCLVDALGNRTMRPCLSSAVKIQAEELTKEDFKGVKWLVMRYGIYNLEVIHAAIRMAKQEGVFVSLDLASFEMVRNFRGPLLELLQSGDIDLCFANEDEARELLRDDENASPEAALEFLAKHCQWAVVTLGSNGCLAKCGREMVRVAAIGEAKATDATGAGDLFAGGFLYGLVKGLSLEECCRVGTCSGGSVIRSLGGEVTPENWQWMYKQMQIKGLPVPGLRQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1083 386 Gene3D - 45 363 IPR029056 -
Vvi18g1083 386 PANTHER SUGAR KINASE 31 377 - -
Vvi18g1083 386 MobiDBLite consensus disorder prediction 1 26 - -
Vvi18g1083 386 Pfam pfkB family carbohydrate kinase 100 360 IPR011611 -
Vvi18g1083 386 MobiDBLite consensus disorder prediction 1 38 - -
Vvi18g1083 386 SUPERFAMILY Ribokinase-like 47 360 IPR029056 -
Vvi18g1083 386 CDD adenosine_kinase 39 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1083 Vvi-Chr18 10869741 10873174 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1083 - - vvi:100252232 768.459