Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1080 ATGGAGAGAGTTGAGGGTGATGCCGCCTCCACGGTGGCCCCTCTTGCCAAGTGGAAAAATGACTTTTCGAGGGCATTTCAGCATTATTTGGATAAATCAACTCCTCATCCAGTCCATAGGTGGCTCGGAACTCTTGCTGTTGCAGCAATTTATGTCTTACGGGTTTACTATGTTCAAGGGTTCTACATTGTATCATATGGCCTTGGAATATATATCTTGAATCTGTTGATTGGGTTTCTGTCACCAAAGGTCGATCCAGAGCTTGAAGTCTTGGATGGAGCTTCATTACCAACAAAAGGCTCAGATGAATTTAAGCCTTTCATTCGCCGCCTCCCCGAGTTCAAGTTTTGGTATTCCATTACCAAAGCTTTCTGTGTGGCCTTTCTGATGACCTTCTTTTCTGTATTCGACGTCCCTGTTTTCTGGCCCATACTACTCTGCTATTGGATTGTTCTATTTGTCCTCACCATGAAGCGACAAATCATGCACATGATTAAGTACAAATATGTCCCATTCAGCATTGGAAAGCAGAGGTATACTGGGAAGAAGTCTGCTGCAAGTAGCAGGGGATTACCAAGGGACTGA 585 0.4427 MERVEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSITKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYTGKKSAASSRGLPRD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1080 194 PIRSF AtER_Rer1p 1 189 IPR004932 GO:0016020
Vvi18g1080 194 PANTHER PROTEIN RER1 7 186 IPR004932 GO:0016020
Vvi18g1080 194 Pfam Rer1 family 18 180 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1080 Vvi-Chr18 10849602 10853976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1080 1 193 Miscellaneous Gene Families AT2G21600 72.539 7.80e-106 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1080 - - vvi:100241970 394.045