Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1077 ATGGCCGAGAAAAGCAAGATTCTGATCATCGGAGGAACAGGGTACATCGGAAAGTTCGTGGTCCAAGCCAGTGCAAAATCCGGCCATCCCACCTTCGCTCTCGTCAGAGAAAGCACAATTGCCGATCCTGTTAAGGGAAAACTCATCCAGGAGTTCAAGAACTCCGGCGTCACCTTGCTCCACGGAGACTTGTACGACCACGATAGCTTGGTGAAGGCGATAAAGCAAGTGGATGTGGTGATATCTACAGTAGGATTCATGCAGTTAGCTGATCAGGTGAAGATCATTGCTGCCATCAAGGAAGCCGGGAATGTTAAGAGATTCTTACCTTCAGAATTTGGAAACGATGTGGATCGTGTTAATGCGGTTGAACCAGCAAAATCCGCGTTTGCAGCAAAGGTTCAAATGCGCAGGGCCATCGAGGCTGAAGGGATTCCCTACACCTTTGTAGTGGCCAACTGCTTTGCAGGCTATTTTCTCCCTACATTGGTCCAGCCAGGCGTTTCTGCTCCTCCCAGAGACAAAGTCATCATATTAGGGGACGGAAATCCAAAGGCATGCTTTAACAGGGAAGATGATATTGGAACCTACACCATCAAAGCTGTGGATGACCCAAGGACATTGAACAAGATCCTCTACATCAAACCTCCCAACAGCACACTCTCATTTAATGAGCTTGTTTCCTTATGGGAGAGTAAGATTGGCAAAACCCTTGAAAAGGTTTATGTTCCAGAGGAGCAAGTTCTGAAGGACATTCAAGAGGCCCCAATGCCGATTAATGTTTTCTTATCGATCCAGCACTCTGTTTTTGTGAACGGAGACCAAACTAACTTTGAGATAGAGCCCTCTTTCGGGGTGGAAGCTTCTGAGCTTTATCCTGACGTCAAATACTGCACTGTGGATGAATATCTCAGTGCGTTTGTCTGA 927 0.4693 MAEKSKILIIGGTGYIGKFVVQASAKSGHPTFALVRESTIADPVKGKLIQEFKNSGVTLLHGDLYDHDSLVKAIKQVDVVISTVGFMQLADQVKIIAAIKEAGNVKRFLPSEFGNDVDRVNAVEPAKSAFAAKVQMRRAIEAEGIPYTFVVANCFAGYFLPTLVQPGVSAPPRDKVIILGDGNPKACFNREDDIGTYTIKAVDDPRTLNKILYIKPPNSTLSFNELVSLWESKIGKTLEKVYVPEEQVLKDIQEAPMPINVFLSIQHSVFVNGDQTNFEIEPSFGVEASELYPDVKYCTVDEYLSAFV* 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1077 308 PANTHER PINORESINOL REDUCTASE-RELATED 3 308 - -
Vvi18g1077 308 Gene3D - 154 304 - -
Vvi18g1077 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 274 IPR036291 -
Vvi18g1077 308 FunFam Bifunctional pinoresinol-lariciresinol reductase 1 6 169 - -
Vvi18g1077 308 Pfam NmrA-like family 7 243 IPR008030 -
Vvi18g1077 308 Gene3D - 6 294 - -
Vvi18g1077 308 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g1077 Vvi-Chr18 10844456 10845898 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1077 K23050 - vvi:100264250 605.52