Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1062 ATGGATGCCAATGCTTCTTCGTTCAAGATAATATTAGGATCAGCCTCAGTTGCGCGCAGAAAAATACTAGCTGAGATGGGATATGAATTCACAGTTATGACTGCAGACATAGATGAAAAAGGCATCCGAAAAGAAAAGCCTGAGGAGTTGGTAATGGCTATTGCAGAGGCAAAGGCAGATGCCATCATATCAAAGCTTCAAACCATCGATAATCGGGAGAAGGATACCAAACCAACAATTTTGGTTGCTGCTGACACAGCAGAAGCCATCTTACCGAAGCTCCCTGTTGGTCATTACAAAATGGATGCTGAGCCAACACTTTTAATTACATCTGACCAAGTGGTGGTCTATGAAGGTATGGTCAGGGAAAAACCATCCAGCAAGGAAGAAGCCCGCCAATTCATCAAAGATTACTCTGGTGGACACGCTGCAACAGTGGGATCTGTTATCATTACAAACCTTAAGACAGGATTCAGAAAAGGAGGGTGGGATAAAGTGGAGATTTATTTCCATGAGATTCCAGATGAGATGATTAACAAACTGATAGAGGAGGGTACTGTGCTGTACGTTGCTGGTGGACTAATAATAGAACACCCTTTGATACTACCCTTCATTAAGGAAGTGGTGGGAACAACTGACAGTGTCATGGGACTTCCCAAAGCGCTCACGGAAAGACTCATAAAGGAGGCCCTCTAG 696 0.4382 MDANASSFKIILGSASVARRKILAEMGYEFTVMTADIDEKGIRKEKPEELVMAIAEAKADAIISKLQTIDNREKDTKPTILVAADTAEAILPKLPVGHYKMDAEPTLLITSDQVVVYEGMVREKPSSKEEARQFIKDYSGGHAATVGSVIITNLKTGFRKGGWDKVEIYFHEIPDEMINKLIEEGTVLYVAGGLIIEHPLILPFIKEVVGTTDSVMGLPKALTERLIKEAL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1062 231 PIRSF Maf 1 231 IPR003697 GO:0047429
Vvi18g1062 231 FunFam Maf-like protein, expressed 86 230 - -
Vvi18g1062 231 Pfam Maf-like protein 9 229 IPR003697 GO:0047429
Vvi18g1062 231 Hamap dTTP/UTP pyrophosphatase. 9 231 IPR003697 GO:0047429
Vvi18g1062 231 Gene3D - 2 230 IPR029001 -
Vvi18g1062 231 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 8 86 IPR003697 GO:0047429
Vvi18g1062 231 SUPERFAMILY ITPase-like 8 228 IPR029001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1062 Vvi-Chr18 10724402 10745965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1062 - - vvi:100242088 441.039