Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1046 ATGGGTTCCAGAGAGAGGGACAGAGACCTCGAGCTCCTGATCCCAGTAGCCGCCACCACTGACAATGTTGCCTCCAAATCATCGCCCTCCTCTCCATCCTCTTCTTCTTCCCATCATCACTCCGGCCGTGAGGCATTTTCCAAAGTCATCCGCAGCTGGGCCTCAAAGAAGTTTATGTCTGGATGTGTCATTCTACTTCCTATTGCCATTACATTCTATATCACTTGGGGTTTCTTTCATTTTGTGGATGGTTTCTTCTCCCCAGTTTATAATCAACTAGGCATCAATGTATTTGGTCTTGGATTCATCACTTCCATCACTTTCATCTTCTTAGTTGGTGTTTTCATGTCTTCCTGGTTGGGAGCTTCTCTTCTCGGCCTTGGGGAATGGTTCATCAAGAAAATGCCACTTGTAAGCTATATATATTCTGCCTCAAAGCAAATTAGTGCAGCAATATCACCAGATCAGAGTTCTAACGCATTCAAGGAAGTGGCCATCATAAGACATCCACGAATCGGGGAATATGCATTTGGATTTATCACTAACACAGTTCTTCTTCAGAGGAACACAGGTGAAGAGGAACTGTGCTGCATTTACGTGCCTTCCAACCACCTCTATATTGGAGATGTTTTTCTCATCAGTTCAATGGATATTCTTAGGCCTAATTTGTCTGTTCGAGAAGGGATTGAAATTGTCATTTCTGGAGGCATGTCAGTACCTCAAATTTTAACCACAATAGATGCACAAGCCATTCCAGCATCAAGAATCGGCAATTTGGTAGCAGCAAAAGTCTAA 795 0.434 MGSRERDRDLELLIPVAATTDNVASKSSPSSPSSSSSHHHSGREAFSKVIRSWASKKFMSGCVILLPIAITFYITWGFFHFVDGFFSPVYNQLGINVFGLGFITSITFIFLVGVFMSSWLGASLLGLGEWFIKKMPLVSYIYSASKQISAAISPDQSSNAFKEVAIIRHPRIGEYAFGFITNTVLLQRNTGEEELCCIYVPSNHLYIGDVFLISSMDILRPNLSVREGIEIVISGGMSVPQILTTIDAQAIPASRIGNLVAAKV* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1046 264 MobiDBLite consensus disorder prediction 20 40 - -
Vvi18g1046 264 Pfam Protein of unknown function (DUF502) 104 204 IPR007462 -
Vvi18g1046 264 PANTHER COV-LIKE PROTEIN 1 12 246 IPR007462 -
Vvi18g1046 264 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1046 Vvi-Chr18 10584283 10587821 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1046 - - vvi:100247211 499.204