Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1045 ATGGCTTCCTCTACTCTAATCTGCGATACTGAGCCATGGAAGAACTTGAGGGCTCACGTTGAGGATATTAAAAAGACTCACTTGCGTGATTTGATGAGTGACACGAAGAGATGCCAGTCAATGATGGTCGAGTTTGACGGGTTGCTGTTGGACTACTCACGGCAGTGTGCCACTCTGGAAACCATGGATAAGCTCTTCAAATTGGCAGAGGCAGAAAATCTCAAACAAAAAATTGGCAGAATGTACAATGGAGAGCGTATAAACAGTACAGAGAATAGGCCGGTACTTCATGTAGCTCTCCGTGCTCCAAGGGATTCTGTTATACAGAGTGATGGCAAAAATGTGGTCCCAGATGTCTGGAAAGTTCTAGACAAGATCCAAGTATTTTCTGAGACAGTCCGCAGTGGTTCCTGGGTTGGAGCCACTGGAAAAGCATTGACAGATGTAATTTCTGTGGGCATTGGTGGCAGCTTCTTAGGCCCTCTTTTTGTGCACACTGCTCTGCAAACAGATCCAGAGGCTAGTAAATTTGCAAAAGGGCGCCAGCTGCGTTTCCTTGCAAATGTTGATCCTGTCGATGTGGCTAGAAATATCACAGGGCTGAACCCTGAAACTACTTTAGTTGTGGTGGTTTCAAAGACTTTTACAACAGCTGAAACTATGTTGAATGCCCGTACTCTAAGGGAATGGATTTCAGCTGCTCTAGGGCCTTCAGCAGTAGCAAAGCATATGGTGGCTGTCAGTACTAATCTTACGCTTGTAGAACAGTTTGGCATTGATCCTAATAATGCTTTTGCATTCTGGGACTGGGTAGGAGGCCGATATAGTGTTTGCAGTGCTGTTGGTGTGCTGCCTTTATCTCTCCAATATGGTTTCTCAGTTGTTGAGAAGTTCCTGAAGGGAGCTTCAAGCATTGATCAACATTTCTATTCAGCACCATTTGAGAAGAACATACCTGTGCTTTTAGGTTTGTTGAGTGTATGGAACGTTTCATTTCTTGGATATCCTGCAAGAGCAATCTTACCATACTCCCAAGCCCTGGAGAAGTTTGCCCCACATATCCAACAGGTTAGCATGGAGAGTAATGGAAAGGGCGTCTCAATTGATGGTGTGCCACTTCCATTTGAGGCTGGTGAAATTGATTTTGGTGAGCCAGGAACAAATGGTCAGCACAGCTTTTACCAACTAATTCACCAGGGTCGTGTTATTCCTTGTGATTTTATTGGTGTTGTAAAGAGTCAGCAACCTGTGTACCTGAAAGGTGAAGTGGTGAGTAACCACGATGAGCTCATGTCTAACTTCTTTGCACAGCCAGATGCTCTTGCTTATGGAAAGACCCCAGAACAATTGCAAAATGAGAATGTTCCCCAGCATCTTATTCCTCACAAGACGTTCTCTGGCAACCGGCCTTCTTTGAGCCTTCTGCTTCCATCACTGAATGCTTATAATATTGGACAGTTGTTGGCAATCTATGAACATAGAATTGCTGTGGAAGGTTTTGTATGGGGTATCAATTCTTTTGACCAGTGGGGAGTCGAGTTAGGGAAGTCATTGGCATCCCAAGTCCGAAAGCAACTTAATTCAGCTCGAACGAAGGGAAAACCAGTTGAAGGATTTAACTACAGCACTACTACTTTGTTAAAGAGATATCTGGAGATCTAG 1662 0.4428 MASSTLICDTEPWKNLRAHVEDIKKTHLRDLMSDTKRCQSMMVEFDGLLLDYSRQCATLETMDKLFKLAEAENLKQKIGRMYNGERINSTENRPVLHVALRAPRDSVIQSDGKNVVPDVWKVLDKIQVFSETVRSGSWVGATGKALTDVISVGIGGSFLGPLFVHTALQTDPEASKFAKGRQLRFLANVDPVDVARNITGLNPETTLVVVVSKTFTTAETMLNARTLREWISAALGPSAVAKHMVAVSTNLTLVEQFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKFLKGASSIDQHFYSAPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQNENVPQHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEGFVWGINSFDQWGVELGKSLASQVRKQLNSARTKGKPVEGFNYSTTTLLKRYLEI* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1045 553 Gene3D - 509 552 IPR023096 GO:0004347|GO:0006096
Vvi18g1045 553 PRINTS Glucose-6-phosphate isomerase signature 499 512 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 PRINTS Glucose-6-phosphate isomerase signature 343 364 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 PRINTS Glucose-6-phosphate isomerase signature 265 283 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 PRINTS Glucose-6-phosphate isomerase signature 149 168 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 PRINTS Glucose-6-phosphate isomerase signature 467 485 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 PRINTS Glucose-6-phosphate isomerase signature 485 499 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 ProSitePatterns Phosphoglucose isomerase signature 2. 499 516 IPR018189 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 Gene3D - 102 294 - -
Vvi18g1045 553 CDD SIS_PGI_2 336 522 IPR035482 -
Vvi18g1045 553 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 5 552 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 FunFam Glucose-6-phosphate isomerase 6 99 - -
Vvi18g1045 553 FunFam Glucose-6-phosphate isomerase 297 508 - -
Vvi18g1045 553 SUPERFAMILY SIS domain 8 551 IPR046348 GO:0097367|GO:1901135
Vvi18g1045 553 Gene3D - 295 508 - -
Vvi18g1045 553 FunFam Glucose-6-phosphate isomerase 509 553 - -
Vvi18g1045 553 CDD SIS_PGI_1 120 288 IPR035476 -
Vvi18g1045 553 Gene3D - 5 101 - -
Vvi18g1045 553 Pfam Phosphoglucose isomerase 51 547 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 ProSitePatterns Phosphoglucose isomerase signature 1. 269 282 IPR018189 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 Hamap Glucose-6-phosphate isomerase [pgi]. 45 526 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 10 553 IPR001672 GO:0004347|GO:0006094|GO:0006096
Vvi18g1045 553 FunFam Glucose-6-phosphate isomerase 100 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1045 Vvi-Chr18 10555647 10581381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1045 K01810 - vvi:100252335 1092.03