Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1042 ATGGAGGGGAATCCTGCGACCACAAGCAGTATGAAGATGCATAGCTCAGAGAGCGGTAACTCATTTGGGGGAAAAGGCGGGTACAAGTTCTGGGCTCTGGCGGCCATTCTCCTACTGGCCTTTTGGTCCATGTTCACTGGCTCCGTCACCCTTAAATGGTCCGCCTCTAACCTCTCCCGTTTCCCCGACGACATCGACTCTCCCACCCACGATGATCTCGACGTCCTGGAAGTGGAGGAGAGAGAGAAACTGGTGAGGTATATGTGGGATTTGTACACTCATACCACCACTTCCCGATTGCCACGTTTCTGGGAGGAGGCTTTTGAAGCTGCTTACATGGAATTGGCCAGCGATGTTCCCTCCGTCCGAAACGCCGCCGTCCTCGAGATTGCCAAGATGTCCTTGCGCTCCATTCATCTCCACCCACTTCCTCTCCATTCCACTGGTAGAAGAGAAACAAGAAAGAATGTGAAGCAAGCAGAACTAGGGAAGGAGGTATCTGGTGTTAATAGTAGTCAATAA 522 0.5192 MEGNPATTSSMKMHSSESGNSFGGKGGYKFWALAAILLLAFWSMFTGSVTLKWSASNLSRFPDDIDSPTHDDLDVLEVEEREKLVRYMWDLYTHTTTSRLPRFWEEAFEAAYMELASDVPSVRNAAVLEIAKMSLRSIHLHPLPLHSTGRRETRKNVKQAELGKEVSGVNSSQ* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1042 173 MobiDBLite consensus disorder prediction 146 173 - -
Vvi18g1042 173 Pfam Protein of unknown function (DUF1195) 6 142 IPR010608 -
Vvi18g1042 173 PANTHER OS03G0411600 PROTEIN 10 162 IPR010608 -
Vvi18g1042 173 MobiDBLite consensus disorder prediction 146 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1042 Vvi-Chr18 10526739 10528568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1042 - - vvi:100264357 325.479