Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1040 ATGAGGAAGCTGTGTCCGAATTTTGACAAAGAAAATGGGCTGGAGACAGTGCTGGAGGTGCCCATTCCAGAGGAGATGTTCAAGAGCATGGGCAGCAATGTGGCCCTGAGATGGCAGAACATGCGTGCTTTCATGAAGGGGCAATGTATAGATAAGGCTTCCCGCCTGTCGGATGGATGTGGCCCTGAGTTTCGGTTATTGCTTAAACTTGTTGGCTCTCCTCTTATCCCCGTTCAGGTTCCCTTGGAGTATGGAGCTACTTTCCCTATCAAAGATTGTTCTATTGAAGCTTCGACGGCAAAGTATATAGTGCAACAATACATAGCGGCAACGGGAGGGTGGGCAGCATTAAATGCAGTGCACAGCATGTACGCGGTGGGGCAGGTCAGGATGATATCATCGGATATGAGCGAGGGCGAGGAAAGAGTCGACCCCAAAGGCAACGGTGAAGTTGGTGGGTTCGTCCTCTGGCAAAAGAATCCCGACTTGTGGTACCTTGAACTCGTTGTTTCCGGTTGCAAGGTCAGCGCCGGTAGTGACGGAAAAGTAGCCTGGGGTCAGACCTCCTCTCAAGCGTCTCACGCTAACAGAGGCCCTCCAAGGCCTTTGCGCCGCTTCTTTCAGGGGTTGGACCCCAGGTTTACAGCCAACCTATTCCTAGACGCAGTGTGCATTGGAGAGAAGACCATCAACAATGAAGACTGTTTCATTCTGAAGATGGAGACGAGCGCCAGCGTCCTCAAGGGGCAGAGCACGCCCAAAACGGAAATCGTTCACCATACCGTGTGGGGATACTTCAGCATGCGAACTGGGCTGCTCATACAGTTCGAGGACACAAAGCTAGTAAGAATGAAGGCTGTCAAGGGAGAAGAGAGCGTGTTCTGGGAAACGAGTCTGGAATCCGTGATCGAGGACTACAGATACGTGGACGGCATCAATATAGCCCACGGCGGTAAGACCACTGCGACTCTGTACAGATACGGAGAGGCGTCAAACCACAAGAGAAGGATTGAGGAGACGTGGGGCATTGAAGAGATTGATTTCAATATATGCGGTTTGACGATGGAGTCCTTTCTGCCCCCTGCTGATCTCAAGATATATCAGGACGGTGGGAAGTAA 1119 0.5147 MRKLCPNFDKENGLETVLEVPIPEEMFKSMGSNVALRWQNMRAFMKGQCIDKASRLSDGCGPEFRLLLKLVGSPLIPVQVPLEYGATFPIKDCSIEASTAKYIVQQYIAATGGWAALNAVHSMYAVGQVRMISSDMSEGEERVDPKGNGEVGGFVLWQKNPDLWYLELVVSGCKVSAGSDGKVAWGQTSSQASHANRGPPRPLRRFFQGLDPRFTANLFLDAVCIGEKTINNEDCFILKMETSASVLKGQSTPKTEIVHHTVWGYFSMRTGLLIQFEDTKLVRMKAVKGEESVFWETSLESVIEDYRYVDGINIAHGGKTTATLYRYGEASNHKRRIEETWGIEEIDFNICGLTMESFLPPADLKIYQDGGK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1040 372 PANTHER LIPASE 1 365 IPR006873 -
Vvi18g1040 372 Pfam Protein of unknown function (DUF620) 123 361 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1040 Vvi-Chr18 10519651 10520983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1040 - - vvi:100257372 762.681