Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1017 ATGATTGGGTCGGTGCTGATATCGATGGAGCGGTGCTGTCATAAAGAGAATACTGTCCTGGGCTGCAGGCATCAGAGATCACTCGTGACCTCTGTTTCGTCGCCCAAGACTCCGTTGAGACACTCCGACGTCGATTTTCACGACGTCTTCGGCGGTCCGCCGCGGCGGTTGTCGAATCAGGTTACGCGATACAGCTTCGGGGAAGGTACGGAACCATCCGCGTTGAGAGGAGGTGAGGATGGAGTTTCGGTCTGCAATCCGTGGACTGGTCTTAGTGAGAAGCCTGTGTTTGGCGAAGACGGTGGTAATCGGCGGCGGTACCACAGCGAGGACTTCTTCGACGATATCTTTAGAGGCGACAACTCTGTGAATACCAGTCCAAGAGGGCATGATCTGGATCCGTTTTCTTCTTCTCCGGGTTCGCGGGTTCTGAGCCCCGCCCAGCCATTGCCGCCGCCCCAAGCGGAGATTTTCGGAAGCTCGTCTAATCCTGCTCAATTGAGCACCAGCCTCCCCTCAAAAGTGACCAGAGCAATGGATTTTCACTCACTTAGGGAACCCGGTGCTTCAAATGGGTCAAGCTATCCATATTCTCCACCCTCGAGATTTTCAAATCAAACAATCCAAGGTCAGGATGGGCTGAAAAATGACCCTTGGCCATCTTATCGCCAGAGTCGGTTATCCCATGAATTTTCTCTTGCAGGTGACGAGTCACCAAAGCTGACCACATCTAATAGAGCAGACATGGGAGACAACTTAGAAAATGGTTCAAATAGCTCCAAGGTTGAAATCAATACCAGCCAATCCCACTTTTCTCTATACAAATGGGCAAGTAAAGGAGTACCATTTGTAACCCCTCTTAGGAGACTAAACAGTTCAAGGACAAAAGTAAAGAGCAAGACTGAGAGATGCTCAAGCACTAATGGAAGGTTCCAAAGTGAGAGAATGGTGAGTGAATTACCCGAAGCAATTATGCATGATGTTGAATATCATTATACTGATGATACATCAGCAAGTACCAAGTCCTTCAAGATTGACCGTGAGAAGCAAAAAAATGATGCTCTTTTTACTAAAATCACTCAAGACAGATTAGAAGAGTGCCAAATTGTTGAAGAGGTGGTTCTTGCTATTCCCAATCTGGAACCCCTTAATAAAACTCATAACAGAATTGAAGATGATGCTGTATTGTCCAATACAAGAAAAGAAGGGAAACCTTATTCTTTGTCCGAAACAGGTTTATGTGGAAAAGCAGAGAAAGAAATTTCTGTGCTTGCACATGAAGTTAGCAACCCTGAGTTGAAATCTCTACGTTCATTGTTGCATGAGACTGATGATGGACAAGGCACCGATAAGGTAACTGGTAAGGATGGAGGTAAAGAAAGCATGCTAAAAACTACCAAAAAATCATCTGTAGATGTTGTCCCTGAAAATGCAAAGGAGCAGGAAAGAAAAGGAATCGCTTCAGATAGCGCATTAGTGGACAAAGCTAGCTCACAATGTTCACCCAGAAATTCAGGAGACAGTCTTGGGAGAAATGGAGTCAAGGGAAAGGTCAGGGAATTTGTTAAGAAACTCAACCAAGAAGCTTCTTCAAAACCCATAACTAATAGTGAACCTAGTGATCCTCGAAGTCAGAGCTCTAGACGGAAAAATGCTGGCTCTTTTAGAGCTGAGAAAGGAGCACACGTTAGTGCAACTGAAACGGATGAACAAATGCACATGGACAATGCGAACAGGAAGAAAATGGTAGATGAAAATCCTAAACAGCAGCAGAGACGATATTCTGGTTTAAAAACAGCCATCCATAAATCTAGTGGTACTACTTATGTCCAGAAGGATAGCTTGGCATCAGTATCAATACCTGATGATTCTGTGGCGGCACTTAGAGACAGACAGGATTCCTTCCAAGGGAACTTTGTGATAGAAGAATTATCTCAAGAGCAGAGCAAACAACCACAAATTGATGAAGATCATGATGAAATCCAAGTTTCAGATGCTAAAATTCGACAGTGGTTGAGTGGGAAGGAAGGAAACATACGCTCGCTTCTGTCAACTTTACAATATGTTCTATGGCCTGAGAGTGGATGGAAGCCTGTGCCTCTAGTCGATATAATTGAAGGAAATGCAGTAAAGAGAGCTTATCAGAAAGCTTTACTTTGTCTACACCCAGACAAGCTACAGCAGAAGGGTGCTGCTGTGCATCAAAAATACATTGCAGAAAAAGTTTTTGATTCTTTGCAGGAGGCGTGGACTCATTTCAATTCTCTCGGTTCATTTTGA 2280 0.4443 MIGSVLISMERCCHKENTVLGCRHQRSLVTSVSSPKTPLRHSDVDFHDVFGGPPRRLSNQVTRYSFGEGTEPSALRGGEDGVSVCNPWTGLSEKPVFGEDGGNRRRYHSEDFFDDIFRGDNSVNTSPRGHDLDPFSSSPGSRVLSPAQPLPPPQAEIFGSSSNPAQLSTSLPSKVTRAMDFHSLREPGASNGSSYPYSPPSRFSNQTIQGQDGLKNDPWPSYRQSRLSHEFSLAGDESPKLTTSNRADMGDNLENGSNSSKVEINTSQSHFSLYKWASKGVPFVTPLRRLNSSRTKVKSKTERCSSTNGRFQSERMVSELPEAIMHDVEYHYTDDTSASTKSFKIDREKQKNDALFTKITQDRLEECQIVEEVVLAIPNLEPLNKTHNRIEDDAVLSNTRKEGKPYSLSETGLCGKAEKEISVLAHEVSNPELKSLRSLLHETDDGQGTDKVTGKDGGKESMLKTTKKSSVDVVPENAKEQERKGIASDSALVDKASSQCSPRNSGDSLGRNGVKGKVREFVKKLNQEASSKPITNSEPSDPRSQSSRRKNAGSFRAEKGAHVSATETDEQMHMDNANRKKMVDENPKQQQRRYSGLKTAIHKSSGTTYVQKDSLASVSIPDDSVAALRDRQDSFQGNFVIEELSQEQSKQPQIDEDHDEIQVSDAKIRQWLSGKEGNIRSLLSTLQYVLWPESGWKPVPLVDIIEGNAVKRAYQKALLCLHPDKLQQKGAAVHQKYIAEKVFDSLQEAWTHFNSLGSF* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1017 759 FunFam J-domain protein required for chloroplast accumulation response 1 655 758 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 237 260 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 187 214 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 552 573 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 118 171 - -
Vvi18g1017 759 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 34 650 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 492 508 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 119 144 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 440 466 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 473 489 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 440 573 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 184 260 - -
Vvi18g1017 759 SUPERFAMILY Chaperone J-domain 628 754 IPR036869 -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 155 171 - -
Vvi18g1017 759 MobiDBLite consensus disorder prediction 528 551 - -
Vvi18g1017 759 Gene3D DnaJ domain 633 758 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1017 Vvi-Chr18 10298728 10306566 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1017 - - vvi:100264365 1474.91